Segatella copri: LK433_12790
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Entry
LK433_12790 CDS
T07933
Symbol
xseB
Name
(GenBank) exodeoxyribonuclease VII small subunit
KO
K03602
exodeoxyribonuclease VII small subunit [EC:
3.1.11.6
]
Organism
pcoi
Segatella copri
Pathway
pcoi03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
pcoi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
LK433_12790 (xseB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pcoi03400
]
LK433_12790 (xseB)
Enzymes [BR:
pcoi01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.6 exodeoxyribonuclease VII
LK433_12790 (xseB)
DNA repair and recombination proteins [BR:
pcoi03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
LK433_12790 (xseB)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Exonuc_VII_S
TBCA
PUMA_CC
PMEI
YwqH-like
Fez1
ARTD15_N
DUF4763
HU-CCDC81_bac_2
ThrE
Motif
Other DBs
NCBI-ProteinID:
UEA42825
LinkDB
All DBs
Position
complement(3041580..3041774)
Genome browser
AA seq
64 aa
AA seq
DB search
MEKEEMKYEQAVRELEEIVERMENDELDIDQLSEQLKRAKTLVKLCKDKLTKTDEEIKKL
LSED
NT seq
195 nt
NT seq
+upstream
nt +downstream
nt
atggaaaaagaagaaatgaaatacgaacaagccgtaagagaacttgaagaaatcgtagaa
agaatggagaatgatgaactcgatattgatcagctctctgagcagttgaaacgtgccaaa
accttggtgaaactctgtaaggacaaactcaccaagaccgatgaggaaatcaagaaactc
ctcagcgaggattga
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