Segatella copri: LK433_12855
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Entry
LK433_12855 CDS
T07933
Symbol
carB
Name
(GenBank) carbamoyl-phosphate synthase (glutamine-hydrolyzing) large subunit
KO
K01955
carbamoyl-phosphate synthase large subunit [EC:
6.3.5.5
]
Organism
pcoi
Segatella copri
Pathway
pcoi00220
Arginine biosynthesis
pcoi00240
Pyrimidine metabolism
pcoi00250
Alanine, aspartate and glutamate metabolism
pcoi01100
Metabolic pathways
pcoi01110
Biosynthesis of secondary metabolites
pcoi01240
Biosynthesis of cofactors
Module
pcoi_M00051
De novo pyrimidine biosynthesis, glutamine (+ PRPP) => UMP
Brite
KEGG Orthology (KO) [BR:
pcoi00001
]
09100 Metabolism
09104 Nucleotide metabolism
00240 Pyrimidine metabolism
LK433_12855 (carB)
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
LK433_12855 (carB)
00220 Arginine biosynthesis
LK433_12855 (carB)
Enzymes [BR:
pcoi01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.5 Carbon-nitrogen ligases with glutamine as amido-N-donor
6.3.5.5 carbamoyl-phosphate synthase (glutamine-hydrolysing)
LK433_12855 (carB)
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Gene cluster
GFIT
Motif
Pfam:
CPSase_L_D2
CPSase_L_D1
CPSase_L_D3
MGS
ATP-grasp
Dala_Dala_lig_C
ATPgrasp_Ter
RimK
GARS_A
ATP-grasp_5
ATP-grasp_3
DUF7159
Motif
Other DBs
NCBI-ProteinID:
UEA44352
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All DBs
Position
3055465..3058695
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AA seq
1076 aa
AA seq
DB search
MKKQLKKVLVLGSGALKIGQAGEFDYSGSQALKALREEGISSVLINPNVATIQTSEGIAD
KVYFLPVTPFFVTEIIKKERPDGIMLAWGGQTGLNVGTELYLNGVLKEYGVDVLGTSVEA
IMNTEDRDLFVKELNKVDLKVPVSHACENMEEAVAAARNIGYPIMIRSAYALGGLGSGVC
KTEEEFKEIAESAFTFAPQVLVEESLKGWKEIEFECIRDANDRCFTVASMENFDPLGIHT
GESIVVAPTCSLTDEQVKMLQDIAVKCVRHLNIVGECNIQYAFNAETNDYRIIEINARLS
RSSALASKATGYPLAFVAAKIALGYTLDQIGEMGTPNSAYVAPSLDYMICKIPRWDLTKF
VGVSRKIGSSMKSVGEIMSIGRSFEEMLQKGLRMIGQGMHGFVGNDHTKFDNLDEELSNP
TDLRIFAIAQALEEGYTIERIEELTKIDPWFIERMKNIVDYKHKLSEYNTLEEIPAEVLR
EAKVLGFSDFQIGRFVLKTQNTNMEKEVLAVRALRKKLNILPAVKRIPTVASEHPDLTNY
LYMTYAVEGYDINYYKNEKSVIVLGSGAYRIGSSVEFDWCSVNAINTARKLGYKSIMINY
NPETVSTDYDMCDRLYFDELSFERVLDVIDLESPRGVIVSVGGQIPNNLAMKLHRQSVPI
LGTSPVNIDRAENRGKFSAMLDKLGIDQPKWSALTSMEDVQKFIDEVGYPVLVRPSYVLS
GAAMNVCHDDEELRRFLEAASEVSKEYPVVISQFMTETNEIEFDGVAQNGEIVEYGISEH
VEYAGVHSGDATMTFPAQQISFATARQIKKISRAIAKELNISGPFNIQYLAKGRDVKVIE
CNLRASRSFPFVSKVLKRNFIETATRIMLDAPYQKPDKSAFDIDRMGVKASQFSFARLQN
ADPVLGVDMSSTGEVGCMGDTFEEALLNSLIATGYKIPSKDKGIMLSSGGAKEKASLLDA
AQALVKNGYTIYATAGTAKFLNENNVKATAVGWPDEDHKDLPNVMQMIADHKFDLIVNIP
KNHTKRELTNGYRIRRGAIDHNIPLITNARLASAFIEAFCTLSQDQLQIKSWQEYE
NT seq
3231 nt
NT seq
+upstream
nt +downstream
nt
atgaagaaacagcttaagaaagtcctcgttctgggttccggtgctttgaagatcggccag
gcaggtgagtttgactattccggttcgcaggctctcaaggctttgcgcgaggagggtatt
agttccgtcctcattaatccaaacgttgctacaattcagacaagtgaaggtattgctgac
aaggtttatttcttgccggtgacacctttttttgtaactgaaattatcaagaaggagcgc
ccagacggcatcatgctggcttggggtggccagacgggtttgaacgttggtacagaactt
tacctcaacggtgtgctcaaggagtacggtgtggatgtgttgggtacttcggtagaggct
atcatgaacacggaagaccgcgacctcttcgtaaaggagcttaacaaggttgacctcaag
gttcctgtaagccacgcttgcgagaacatggaggaggctgtggctgcggcacgcaacatc
ggctaccctatcatgatccgttctgcctacgcgctgggtggtctcggttctggtgtctgc
aagaccgaagaggagttcaaggagattgctgaatctgccttcactttcgcacctcaggta
ctcgttgaagagagcctgaagggatggaaggagattgagtttgagtgcatccgtgatgcg
aacgaccgttgcttcaccgttgcctctatggaaaacttcgacccactcggaatccataca
ggtgagtctatcgttgtggctccaacctgttctctcaccgacgagcaggtgaagatgttg
caggacatcgccgtgaagtgcgtccgtcacctcaacatcgtgggtgagtgcaacatccag
tatgctttcaatgctgagaccaacgactatcgtatcatcgagatcaatgctcgcttgagc
cgttcttctgccctcgcttctaaggctaccggttatccgctcgccttcgttgcagccaag
attgccctcggttatacgctcgaccagattggcgagatgggtactcctaactcagcttat
gtggctccatcactcgactatatgatctgtaagattcctcgttgggaccttaccaagttt
gtcggtgtaagccgcaagattggttcttccatgaagtctgtaggcgaaatcatgtctatc
ggccgttctttcgaggagatgctccagaagggtctccgtatgattggtcagggaatgcac
ggtttcgtaggcaacgaccacaccaagtttgataacctggatgaggaactttccaaccct
accgacctccgtatcttcgccatcgcccaggctctggaggaaggttacaccatcgagcgc
atcgaggagttgaccaagattgacccttggttcatcgagcgcatgaagaatatcgtagat
tacaagcacaagctttctgaatataatacgctggaggagattccagccgaggtattgcgc
gaggctaaggtattgggcttctctgacttccagattggccgcttcgtattgaagactcag
aacaccaatatggagaaggaggtactggcagttcgtgccctgcgtaagaagttgaacatt
ctgcctgcagtaaagcgcatccctactgtggctagcgagcatcctgacctcaccaactat
ctctacatgacatacgctgtagagggttacgacatcaactactacaagaacgagaagtct
gtcatcgttctcggttcgggtgcttaccgcatcggttcttctgtagagttcgactggtgt
tcagtaaacgccatcaatacagcccgcaagttgggttacaagtcaatcatgatcaactac
aacccggagaccgtatctaccgactacgatatgtgcgaccgtctctacttcgatgagctt
tcattcgagcgtgtactcgatgtcatcgacctggagtcaccacgtggcgtgatagtttct
gtaggtggtcagattccaaacaacctggctatgaagcttcatcgccagtctgtgccaatc
ctgggcacatctcctgtcaacattgaccgtgccgagaaccgcggtaagttctctgccatg
ctcgataagttgggtatcgaccagcctaagtggagcgccctcacctctatggaggatgtt
cagaagttcatcgacgaggtaggctatcctgttctcgttcgtccatcttacgttctttcc
ggtgcagccatgaacgtttgccacgatgatgaggagttgcgtcgcttcctggaggcagct
tctgaggtttctaaggaatacccagtagttatctcccagttcatgacagagaccaacgag
attgagttcgacggtgtggctcagaatggtgagattgtagagtatggtatttcagagcac
gtagagtatgcaggtgttcactccggcgacgctaccatgaccttccctgctcagcagatt
tccttcgctacagcccgtcagatcaagaagatttcacgtgccatcgccaaggagctcaac
atctcgggtcctttcaatatccagtacctggctaagggtcgcgatgtaaaggttatcgag
tgtaatctccgtgcatcccgttcattcccattcgtgagcaaggtattgaagcgcaacttc
atcgagactgctacccgcatcatgctcgatgctccatatcagaaaccggataagtctgct
ttcgatatcgaccgtatgggtgtgaaggcttcacaattctcattcgcccgtttgcagaac
gccgacccagttttgggtgtggatatgagttctaccggtgaggtaggctgtatgggtgat
actttcgaggaggcattgctcaactcattgattgccaccggctacaagattccttctaag
gacaagggcattatgctttcaagcggtggtgccaaggagaaggcttctctgctcgacgct
gcccaggcgctggtgaagaacggttacaccatctatgctacagccggtacagcgaagttc
ctgaacgagaacaacgtgaaggctacagccgtaggatggcctgatgaagaccacaaggat
cttcctaacgtgatgcagatgattgctgaccacaagttcgacctcatcgtcaacatccct
aagaatcacaccaagcgtgagttgaccaatggttacagaatccgtcgtggcgccatcgac
cacaacattcctctgatcaccaatgcccgcctggcttccgccttcatcgaggcattctgc
acattgagccaggaccagcttcagattaagagctggcaggagtacgagtaa
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