Segatella copri: LK433_13235
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Entry
LK433_13235 CDS
T07933
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
pcoi
Segatella copri
Brite
KEGG Orthology (KO) [BR:
pcoi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pcoi03016
]
LK433_13235 (truB)
Enzymes [BR:
pcoi01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
LK433_13235 (truB)
Transfer RNA biogenesis [BR:
pcoi03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
LK433_13235 (truB)
Prokaryotic type
LK433_13235 (truB)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
Motif
Other DBs
NCBI-ProteinID:
UEA42907
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All DBs
Position
complement(3164421..3165137)
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AA seq
238 aa
AA seq
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MDFRKGEIIAIDKPYRMSSFGALAHVRYLLSKKLGFKVKIGHAGTLDPLATGVLVLCTGK
CTKQIEQLQTHTKEYTATLQLGATTASYDKEHSVNHTYPTEHITRQLVEETLKQFVGEIQ
QVPPTYSAVKVNGDRSYALRRAGEEVQLKPKTVRVDEIELTDYNDEEKTASIRVVCGKGT
YIRSLARDIGRALDSGAYLTALRRTKAGSFAVENCISFDHFQEWLDEQPLEDSLQPSK
NT seq
717 nt
NT seq
+upstream
nt +downstream
nt
atggatttcagaaaaggagaaattattgccatcgacaagccttatcgaatgtcgagtttc
ggagccctggcacatgttcgctatctgctcagcaagaagctcggttttaaggtgaagata
ggacatgccggtacgctcgatccccttgccactggcgtgctggtgctctgcaccggtaaa
tgtaccaagcagatagaacagctgcagacccatactaaggagtatacagctaccctgcag
ctcggtgctactaccgccagctacgataaggaacacagcgtgaatcacacctatcctacg
gagcatatcacccgccagctggtggaggaaacgctcaagcagtttgtgggcgagattcag
caggttccgcctacctacagcgccgtaaaggtgaatggcgaccgctcttatgccttgcgc
cgggcaggcgaagaggttcagctcaagccgaagaccgtgcgtgtagacgagatagaactc
accgattataacgatgaggagaagaccgccagcatccgtgtggtttgcggcaaaggcact
tacatccgctccctcgcccgtgatatcggcagggctctcgatagtggcgcataccttacc
gccctccgccgtaccaaggcaggaagttttgcagtagaaaactgcatcagttttgatcat
ttccaggaatggcttgatgagcagcctctcgaagacagccttcagccatccaagtaa
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