Segatella copri: LK433_14225
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Entry
LK433_14225 CDS
T07933
Name
(GenBank) UvrD-helicase domain-containing protein
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
pcoi
Segatella copri
Pathway
pcoi03420
Nucleotide excision repair
pcoi03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
pcoi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
LK433_14225
03430 Mismatch repair
LK433_14225
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pcoi03400
]
LK433_14225
Enzymes [BR:
pcoi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
LK433_14225
DNA repair and recombination proteins [BR:
pcoi03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
LK433_14225
MMR (mismatch excision repair)
Other MMR factors
LK433_14225
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
AAA_19
Viral_helicase1
AAA_30
DEAD
AAA_11
Motif
Other DBs
NCBI-ProteinID:
UEA44506
LinkDB
All DBs
Position
unnamed1:complement(69000..71012)
Genome browser
AA seq
670 aa
AA seq
DB search
MNITDIDINEAEKTLLPKDMHFDDERRDFIKGLESCDLLAVPGSGKTTALQAKLFCMARH
LPLEKDQGILILSHTNNAVNEVKKKLHAECNQLFEAPHFIGTVQDFVDKFLAIPYYEQFY
KQKVHVIDGMAYEQEVERYLKTSIWKLKKATLHLYKKGFNFTDIRIQRTKDGSLKYTRGM
NDELSFKPVKKWIQEGTEQQKHEEIKGDLKIMKQAIMKKGILHYDDCYILADAYIRKYPF
VKKTLRKRFKYVFIDETQDLKKYQLDLIDSIFDSDECCIQRIGDKNQTIFNKPDRDIPDQ
WNIRKVKYLQNSLRLTESIAKVVNPFAVDNVAGNKSESMFTVKGKRQLENGDIPPYLILF
DEYGKNKLLTTFNDLIEKYALRSTVDGKKYGFHIVGWSIRRKGETANGKLRLEDIFPNCE
KASVRGLNSYDTLSKFLVFGCRDYSMYECKTVIQKALVCLLRKLNVYDSDRRLFSKTRLE
NKIMLMGEDDFNDYKLLIYQTSVLLFLKRFSECYTLLVSYLTGSFSRIFEISTNNQVLAD
FCEKDFDTELINAETPSEFPDIEIESVHSTKGQTHCATMYVETSFKDYESSHLFKIKKKA
TRKRPEVLYPNPLFQEKAEYAQVTCKAVMHMMYVGFSRPTHLLCYASYKHNWNNKRIEKM
EQLGWKIINL
NT seq
2013 nt
NT seq
+upstream
nt +downstream
nt
atgaatattacggatatagatataaatgaggcagagaagaccttgcttcctaaggatatg
cactttgatgatgaacgaagagattttatcaaaggtttagaaagttgtgatcttttggct
gtgccaggtagtggaaagaccacagcattgcaggctaaattgttttgtatggcacgccat
ttacctttagagaaagatcaaggtattctcatactttcacataccaacaatgcggtcaat
gaagtaaaaaagaaactccatgctgagtgtaatcagcttttcgaagcacctcatttcatt
ggtacagtacaggattttgttgataaattcttagcgataccatattatgagcaattctat
aagcaaaaagtacatgtaatcgatggaatggcttatgagcaagaggtagaaaggtattta
aaaacttcgatttggaaacttaagaaagcaacgttgcatctatataaaaaagggtttaat
tttacagatattcgtatacaacgtacgaaggatggttcattgaaatatacaaggggcatg
aacgatgaactaagttttaaacctgtaaagaaatggattcaagaaggtacagaacaacag
aagcatgaggagataaaaggagatcttaaaataatgaagcaagcgataatgaaaaaaggt
attcttcattatgatgattgttatatcttagctgatgcatatattcgcaaatatcccttt
gttaaaaagactcttcgtaaacgctttaaatatgtctttatagacgaaacacaagactta
aaaaagtaccagttggatctgatagatagcatatttgatagtgatgaatgttgtattcaa
agaattggagacaaaaatcaaaccatattcaataagccagatagggatattcccgatcaa
tggaacatccgtaaagtcaaatacttgcaaaattcgttgcggctaacagaaagtatagca
aaagttgtcaacccttttgctgttgataatgtagctggcaataaaagtgaatcgatgttc
acagttaaaggaaagagacaattggagaatggtgatattcctccttatttaattttgttt
gatgaatatggcaagaataaactcttgactacattcaatgatttgatagagaaatatgcg
ttacgaagtactgtggatggtaaaaaatacggtttccatattgtcggttggagcattaga
agaaaaggagagactgcaaatggaaagttgcgtttagaagacatatttcccaattgtgaa
aaagcgtctgtaagaggattgaattcatatgatacgttgagtaagttccttgtttttgga
tgccgtgattatagtatgtacgaatgtaaaacggttatacaaaaagcattagtctgcttg
ttacgtaagttgaatgtttatgatagtgatagaaggttattttctaagacacgtttagaa
aataagataatgttaatgggggaagatgattttaatgattataaactgttaatttatcaa
acttctgttttgctctttctaaagcgtttttctgaatgttacactttattggttagttat
ttaactggcagtttctctcgaatttttgagattagcactaacaatcaggtattggcggat
ttttgcgaaaaggattttgatacagaactaataaatgcggaaacaccatcagaatttcct
gatatagaaatagaatctgtgcattccacaaagggacaaacacattgtgcgaccatgtat
gttgagacttcttttaaggattatgaatcatcacatctttttaaaataaagaaaaaagcg
acaaggaaaagacctgaagtgttgtatccaaatcctttgtttcaggaaaaagcggaatat
gcgcaagtgacatgcaaagctgttatgcatatgatgtatgttggtttttcacgtcctacc
catcttctatgttatgcctcttataagcacaactggaataataaaagaatagaaaaaatg
gagcaacttgggtggaaaattatcaatttgtag
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