Proteus columbae: F1325_00460
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Entry
F1325_00460 CDS
T06419
Symbol
phrB
Name
(GenBank) deoxyribodipyrimidine photo-lyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
pcol
Proteus columbae
Brite
KEGG Orthology (KO) [BR:
pcol00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pcol03400
]
F1325_00460 (phrB)
Enzymes [BR:
pcol01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
F1325_00460 (phrB)
DNA repair and recombination proteins [BR:
pcol03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
F1325_00460 (phrB)
Prokaryotic type
F1325_00460 (phrB)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
C1-set
Motif
Other DBs
NCBI-ProteinID:
QHN09037
UniProt:
A0A6I7D8P1
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All DBs
Position
complement(101255..102682)
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AA seq
475 aa
AA seq
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MHPSSVHLVWFRNDLRVTDNKALFNACQDKQAQVHALFTVTPEQWKTHNMALSCQAFIHN
ALLDLSISLAKLNIPLTIVISDTYSNAADKVAEYCQQHQATALFFNHQYALNEQRRDEKV
TELLKNKTTVYAYHDNVFIPPGNVVTQQGEMYKVFTPFRNAFLRLFFSQNNASLPIPEIR
THQKAVSPLKAPLFSLENTSLPSFISTEEEALKRLKQFCYESVPHYAKWRDIPAVDGTSR
LSPYLSIGLLSIRQCFNRLYQTEPDFLENNTSGAFVWFNELIWREFYQHLIVANPNLCKH
IAFQLWTEKINWRNNQDEFNAWTQGATGFPIIDAAMRQLNQTGWMHNRLRMLTASFLIKD
LLIDWRWGERYFMSQLIDGDFASNNGGWQWAASTGTDAVPYFRIFNPTTQGRKFDPDGEF
IRHWLPELANVPNRYIHTPHEWAAKTNNSLDYPLPIVDHAKARIRAIESYEEAKK
NT seq
1428 nt
NT seq
+upstream
nt +downstream
nt
atgcacccgtcttctgttcatttggtctggtttcgtaatgatttaagagtgacggataac
aaagcactctttaacgcttgccaagataaacaagcacaggtgcatgctcttttcaccgta
acgcctgaacaatggaaaacccacaatatggctttatcatgtcaggcgttcattcataat
gctttgctggatctttcaatatcactggcaaaactcaatattccactgacaatcgtgatt
agcgatacttattcaaatgcagccgataaagtggctgagtattgccaacagcatcaagcc
actgccctttttttcaatcaccaatatgcccttaatgaacaacgtcgtgatgaaaaggtc
actgagttactgaagaataagacaaccgtttatgcttatcatgacaatgtgtttattcca
ccaggtaatgtagtcacccaacaaggggagatgtataaagtttttactccctttagaaat
gcattccttcggctctttttttcacaaaataacgcttcgttacctatcccagagatcagg
acacatcaaaaagcggtatcacctttaaaagcaccactattttcacttgaaaatacaagc
ttgccctcttttatctctactgaagaagaggcacttaaacgcttaaagcaattctgttat
gaaagcgtcccacattatgcaaaatggcgagacattcccgcagttgatggtacaagtcga
ttatccccctatctttcgattggattactgtctattcggcaatgttttaatcgcctttat
caaactgaacctgatttcttagaaaacaacacatcaggtgcatttgtttggtttaatgaa
cttatttggcgagaattttaccaacacttaattgtggcaaatcccaatttatgcaaacac
attgcttttcagctttggacagaaaaaatcaattggcgtaacaaccaagatgaatttaat
gcttggactcaaggcgctacgggatttcctattattgatgctgcgatgcgacagcttaat
caaacaggttggatgcataatcgcttacgtatgctcacggcaagttttcttatcaaagac
ttattaattgattggcgttggggtgagcgttattttatgtcacaactgattgatggtgat
ttcgcatcaaataatgggggttggcagtgggctgcatcaacaggaactgatgccgtacct
tattttcgaatttttaatcctactacccaaggtcgtaagttcgatcctgatggtgaattt
atccgccattggcttcctgaactcgccaatgtgccgaatcgctatattcatacacctcat
gagtgggcagcaaaaaccaataattctctcgattacccattacccatagttgatcacgca
aaagcacgaataagagctattgagtcttatgaagaagcaaaaaaataa
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