Proteus columbae: F1325_01500
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Entry
F1325_01500 CDS
T06419
Symbol
pnp
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
pcol
Proteus columbae
Pathway
pcol03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pcol00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
F1325_01500 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pcol03019
]
F1325_01500 (pnp)
03016 Transfer RNA biogenesis [BR:
pcol03016
]
F1325_01500 (pnp)
Enzymes [BR:
pcol01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
F1325_01500 (pnp)
Messenger RNA biogenesis [BR:
pcol03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
F1325_01500 (pnp)
Transfer RNA biogenesis [BR:
pcol03016
]
Prokaryotic type
tRNA degradation factors
F1325_01500 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
PNPase
S1
RNase_PH_C
KH_1
OB_RRP5_4th
S1_2
KH_2
KH-I_KHDC4-BBP
S1_RRP5
Spt6_S1
KH_SLS1_2
Motif
Other DBs
NCBI-ProteinID:
QHN09214
UniProt:
A0A6I7D3C0
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All DBs
Position
295329..297458
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AA seq
709 aa
AA seq
DB search
MLNPTVRKFQYGQHTVSLETGMMARQATAAVMVDMDGTAVFVTVVAKKKVKAGQDFFPLT
VNYQERSYAAGRIPGSFFRREGRPGEGETLIARLIDRPLRPLFPEGFLNEIQIVATVVSV
NPQVNPDIVAMIGASAVLALSGVPFNGPIGGARVGFIDGQYVLNPTVDELKVSKLDLVVA
GTAGAVLMVESEADLLSEEEMLGAVVFGHDQQQVVIENINALVAEVGKEKWDWAPEAINQ
TLHDRIAQLAQARIGDAYRITEKQERYEQIEAIRDEVIATLVAEDETLDEAEISEIFSGL
EKNIVRARVLAGEPRIDGREKDMVRALDIRTGLLPRTHGSALFTRGETQALVTATLGTAR
DAQTIDDIMGEHTDTFLLHYNFPPYSVGETGMMGSPKRREIGHGRLAKRGVLAVMPTIEE
FPYTVRVVSEITESNGSSSMASVCGASLALMDAGVPIKESVAGIAMGLVKEGDNFVVLSD
ILGDEDHLGDMDFKVAGSRNGVSALQMDIKIEGITREIMQVALNQAKSARLHILGVMEDA
ISQPRADISEFAPRIHTIKINPDKIKDVIGKGGSVIRALTEETGTTIEIEDDGTVKIAAT
SGDQAKQAIARIEEITAEVEVGRIYNGKVTRIVDFGAFVAIGGGKEGLVHISQIADKRVE
KVSDYLEMGQEVPVKVLEIDRQGRIRLSMKEAQANQQEATETSSEDSAN
NT seq
2130 nt
NT seq
+upstream
nt +downstream
nt
ttgctgaatcctacagttcgtaaatttcaatacggtcaacatactgtttcgttagaaaca
ggcatgatggctcgtcaagcaacagccgctgttatggttgacatggacggcactgctgtt
tttgtcaccgttgttgcaaagaaaaaagttaaagctggacaagatttcttcccattaact
gttaactaccaagagcgttcatacgctgctggtcgtatccctggtagcttcttccgtcgt
gaaggtcgtcctggtgaaggcgaaacgttgattgcacgtttaattgaccgccctttacgc
ccattattcccagaaggtttcttaaacgaaattcaaatcgttgctaccgttgtttcagtt
aacccacaagttaacccagatatcgttgcaatgattggtgcttctgcggtattagcgctg
tcaggtgttccgtttaatggtcctatcggtggtgcgcgtgttggttttatcgatggacaa
tatgttctaaacccaactgttgatgagctgaaagttagcaaattagacttagtggttgca
ggtactgcgggtgcggtactgatggtagaatcagaagctgatttattatcagaagaagaa
atgttaggtgcagtagtatttggtcatgatcaacaacaagttgtgatcgaaaacatcaat
gcattagttgcagaagtgggtaaagagaaatgggattgggcgccagaagccatcaaccaa
actttacatgaccgtattgcacaattagcacaagctcgtattggggatgcttaccgtatc
actgagaaacaagagcgttatgaacaaatcgaagctatccgtgatgaagttattgcgacg
ttagtagctgaagatgaaactttagatgaagctgaaatcagcgaaatcttctctggtctt
gagaaaaacatcgttcgtgctcgcgtattagctggcgaaccacgtattgatggccgtgaa
aaagacatggtacgtgcattagacattcgcactggcttattaccacgtactcacggttca
gcactgtttactcgtggtgaaactcaggctctggtaactgcaacattaggtactgcgcgt
gatgctcaaactattgatgacatcatgggtgagcacactgatacattcttactgcactat
aacttccctccatactctgttggtgaaacaggcatgatgggttcaccaaaacgtcgcgaa
atcggtcatggccgtttagcaaaacgtggtgtgttagcagtaatgccaacaattgaagaa
ttcccatataccgttcgtgtggtttctgaaatcactgaatcaaatggttcatcttcaatg
gcatctgtttgtggtgcttctttagcactgatggatgcaggtgtaccaattaaagaatct
gttgcaggtattgcaatgggtctagtaaaagaaggcgacaactttgttgttctttccgat
attctgggtgatgaagaccatttaggcgatatggactttaaagttgcgggtagccgtaac
ggtgtcagcgcattacagatggatatcaaaatcgaaggtatcactcgtgaaatcatgcaa
gttgcattaaaccaagcgaaaagcgcacgtctacacattttaggcgtaatggaagatgca
attagccagcctcgtgctgatatttctgaattcgcaccgcgcattcacactatcaaaatt
aatccagacaagatcaaagacgttatcggtaaaggcggttctgttatccgtgcattaacg
gaagaaactggcacaactatcgaaatcgaagatgatggtacagtgaagattgctgcaaca
agtggcgatcaagcaaaacaagctatcgctcgtatcgaagaaattactgctgaagttgaa
gtgggtcgtatctacaacggtaaagtaactcgtattgtagatttcggtgcattcgttgct
atcggtggcggcaaagaaggtctggttcatatttctcaaatcgcagacaaacgcgttgag
aaagtgagtgactacttggaaatgggtcaagaagttccagttaaagtactggaaattgac
cgtcaaggccgtattcgcttaagcatgaaagaagctcaagctaatcagcaggaagcaaca
gaaacttcttctgaagattctgcgaattaa
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