Proteus columbae: F1325_01510
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Entry
F1325_01510 CDS
T06419
Name
(GenBank) DEAD/DEAH family ATP-dependent RNA helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
pcol
Proteus columbae
Pathway
pcol03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pcol00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
F1325_01510
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pcol03019
]
F1325_01510
03009 Ribosome biogenesis [BR:
pcol03009
]
F1325_01510
Enzymes [BR:
pcol01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
F1325_01510
Messenger RNA biogenesis [BR:
pcol03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
F1325_01510
Ribosome biogenesis [BR:
pcol03009
]
Prokaryotic type
rRNA helicases
F1325_01510
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
CMS1
AAA_22
Cas3-like_C_2
DRTGG
UTP25_NTPase-like
Motif
Other DBs
NCBI-ProteinID:
QHN09216
UniProt:
A0A6I7D023
LinkDB
All DBs
Position
298630..300528
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AA seq
632 aa
AA seq
DB search
MTTETDMTFADLGLSAPILTALNDLGYEKPSPIQQQCIPFLLNGNDVLGMAQTGSGKTAA
FSLPLLHNLDESLKAPQILVLAPTRELAVQVAEAIEDFSKHLPKVNVVALYGGQRYDVQL
RALRQGPQVVVGTPGRLLDHLNRGTLDLSKLKGLVLDEADEMLRMGFIEDVENILSKIPA
EHQTALFSATMPEAIRRITRRFMNDPKEVRIQSSVTTRPDISQSYWMTFGARKNEALIRF
LEAEDFDAAIIFVRTKNATLEVAEALERNGYNSAALNGDMNQSLREQTLERLKNGRLDIL
IATDVAARGLDVDRISLVVNYDIPMDSESYVHRIGRTGRAGRAGRAILFVDNRERRLLRN
IERTMKMTIPEVELPNAELISQRRQEKFAQQIAQQLETSNLDQYRALLPKLAPQGEEALD
METLAAVLLKMAQGERALILPPDPVRRPRREFNDRDDRRGDDRRRGDNDRERSPRRERRD
AGEMDLYRIEVGRDDGVEVRHIVGAIANEGDISSRYIGNIKLYGSHSTIELPKGMPTDLL
SHFTRTRIMNKPLNMQLVGDAQSQPFRERRNNSRRDGQPQGGRRFNNGDQPQRRGNNDRG
GERSNDRGGERGNFRSRNNEGTPRRRSSSHNQ
NT seq
1899 nt
NT seq
+upstream
nt +downstream
nt
atgactactgaaaccgatatgacttttgctgatctaggtttatcagcacctattttgact
gcactgaatgacttaggctacgagaagccttctccaattcagcaacaatgtattcctttc
cttttaaacggcaatgatgttttaggtatggcacagacaggtagtggtaaaactgccgca
tttagcctgcctttattacacaatcttgatgaatcattaaaagcaccacaaattttagtt
ttagcacctactcgtgaacttgcggttcaggttgctgaagcaattgaagatttttctaaa
cacttaccaaaagtaaatgttgttgcactgtatggtggtcagcgttacgacgtgcaatta
cgcgcgttacgtcaaggtccacaagttgttgtgggtacaccaggtcgtttattagaccat
ttaaaccgtggcacattagatttatctaaactgaagggcttagtattagatgaagctgat
gaaatgttacgtatgggctttattgaagatgttgaaaacattttaagtaagatcccagca
gaacaccaaactgcactgttctctgcaacaatgccagaagcaattcgtcgtattacacgt
cgctttatgaatgatcctaaagaagtgcgcattcaaagtagcgtaacgacacgtccagac
attagccaaagctattggatgacattcggcgcacgtaaaaatgaagcgttaattcgtttc
ttagaagctgaagattttgatgcggcaattattttcgttcgtactaaaaacgcaacatta
gaagttgctgaagctttagagcgtaacggctataacagcgcagcgttaaatggtgatatg
aaccaatcactgcgtgagcaaacattagagcgtctgaaaaatggtcgtttagatatttta
attgcaactgacgttgctgctcgtggtcttgacgttgaccgtatcagccttgttgtgaac
tatgatatcccaatggattcagaatcttatgttcaccgtattggtcgtactggtcgtgcg
ggtcgtgctggccgtgcaattttattcgttgataaccgtgagcgtcgtttactgcgcaat
atcgaacgtacaatgaagatgactattcctgaagtagaactgccaaatgcagagcttatc
agccaacgtcgtcaggaaaaatttgcacagcaaatcgcacaacaattagaaactagcaac
cttgaccaatatcgcgctctgttaccaaaacttgctccacaaggtgaagaagcgctggat
atggaaacactggctgcggtattactgaaaatggctcaaggtgagcgtgcgcttatcctg
ccaccagatccagttcgtcgccctcgtcgcgaatttaacgatcgtgacgatcgtcgtggt
gatgatcgccgtcgcggtgataacgatcgcgagcgttctcctcgtcgtgaacgtcgtgat
gctggcgaaatggatttataccgtatcgaagtgggtcgtgatgatggtgttgaagtgcgt
catatcgttggtgcgattgctaacgaaggcgatatcagcagccgttacattggtaatatc
aaactgtatggttctcactcaaccatcgaattaccaaaaggtatgccgacagatttatta
agccatttcacacgtacgcgtattatgaacaaaccactgaatatgcaattagtgggtgat
gctcaatctcagcctttccgtgagcgtcgtaataacagccgtcgtgatggtcagccacaa
ggtggtcgtcgttttaacaatggtgatcaaccacaacgtcgtggtaataacgaccgtggt
ggtgagcgtagcaacgatcgtggtggcgagcgcggtaacttccgcagtcgtaacaacgaa
ggtacaccacgccgccgtagcagctctcataaccaataa
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