Proteus columbae: F1325_02055
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Entry
F1325_02055 CDS
T06419
Symbol
fadB
Name
(GenBank) fatty acid oxidation complex subunit alpha FadB
KO
K01825
3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:
1.1.1.35
4.2.1.17
5.1.2.3
5.3.3.8
]
Organism
pcol
Proteus columbae
Pathway
pcol00071
Fatty acid degradation
pcol00280
Valine, leucine and isoleucine degradation
pcol00310
Lysine degradation
pcol00362
Benzoate degradation
pcol00380
Tryptophan metabolism
pcol00410
beta-Alanine metabolism
pcol00640
Propanoate metabolism
pcol00650
Butanoate metabolism
pcol00907
Pinene, camphor and geraniol degradation
pcol00930
Caprolactam degradation
pcol01100
Metabolic pathways
pcol01110
Biosynthesis of secondary metabolites
pcol01120
Microbial metabolism in diverse environments
pcol01200
Carbon metabolism
pcol01212
Fatty acid metabolism
Module
pcol_M00087
beta-Oxidation
Brite
KEGG Orthology (KO) [BR:
pcol00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00640 Propanoate metabolism
F1325_02055 (fadB)
00650 Butanoate metabolism
F1325_02055 (fadB)
09103 Lipid metabolism
00071 Fatty acid degradation
F1325_02055 (fadB)
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
F1325_02055 (fadB)
00310 Lysine degradation
F1325_02055 (fadB)
00380 Tryptophan metabolism
F1325_02055 (fadB)
09106 Metabolism of other amino acids
00410 beta-Alanine metabolism
F1325_02055 (fadB)
09109 Metabolism of terpenoids and polyketides
00907 Pinene, camphor and geraniol degradation
F1325_02055 (fadB)
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
F1325_02055 (fadB)
00930 Caprolactam degradation
F1325_02055 (fadB)
Enzymes [BR:
pcol01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.35 3-hydroxyacyl-CoA dehydrogenase
F1325_02055 (fadB)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.17 enoyl-CoA hydratase
F1325_02055 (fadB)
5. Isomerases
5.1 Racemases and epimerases
5.1.2 Acting on hydroxy acids and derivatives
5.1.2.3 3-hydroxybutyryl-CoA epimerase
F1325_02055 (fadB)
5.3 Intramolecular oxidoreductases
5.3.3 Transposing C=C bonds
5.3.3.8 Delta3-Delta2-enoyl-CoA isomerase
F1325_02055 (fadB)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
3HCDH_N
ECH_1
3HCDH
ECH_2
NAD_binding_2
DUF5546
Motif
Other DBs
NCBI-ProteinID:
QHN09312
UniProt:
A0A6I7D5Y3
LinkDB
All DBs
Position
complement(414918..417098)
Genome browser
AA seq
726 aa
AA seq
DB search
MLYQSENIQADWVKQGIVELIFNAKGSINKLDTKTVAMLSEALTVLEATPGLKGVILRSE
KPAFIVGADITEFLSLFDAPEEELTQWLHFSNQIFSRLEDLPVPTVSAINGYALGGGCEC
VLATDFRISSPDLRIGLPETKLGIMPGFGGSVRLPRLIGVDNALEIITAGKDVDAQTALK
NGLTQAIVPLENLKESAISLIEQAIEGKIDWKAARHPKTTPLRLTELEHKMSFSVAKGMV
MKVAGPHYPAPITAVKTIEKAAFLNRDEALAIETENFVKLTRTDVAKALVGIFLNDQYVK
NITKKRHAELPKQAAVLGAGIMGGGISYQSALKGIPVVMKDINQKSLELGMNEALSLLQK
RQEKGRMSAVDMAKTLASIQPTLNYASVSDADVVVEAVVENPKVKATVLAETEALLTDHA
VLASNTSTIPISLLAKSLKRPENFCGMHFFNPVHRMPLVEIIKGEKTSEETINRIVSYAS
KMGKTPIIVNDCPGFFVNRVLFPYFAGFSLLLRDGADFLAVDKVMEKVFGWPMGPAYLLD
VVGIDTANHAQAVMAQGFPDRMGTIERDAIALLYEQQRYGQKNNHGFYNYTVDKRGKKQK
SVDGQIQTLIQQNAGKTQEFSQDVIIARMMIPMINEVIRCLDEGIIASPAEADIALVYGL
GFPPFRGGVFRYLDTIGLAQFVADAQQYASLGSLYQIPESLKQKAQRNETYYPKPAKVDV
NIRELA
NT seq
2181 nt
NT seq
+upstream
nt +downstream
nt
atgctctatcaaagcgaaaatattcaagccgattgggtgaaacaaggtattgttgaactc
atttttaacgccaaaggttctattaacaaattagataccaaaacggttgcaatgctaagt
gaagctttaaccgtattagaagcaacaccaggcctgaaaggtgttatcttgcgttccgaa
aaaccggcttttattgtcggtgctgatattaccgagtttttatccctttttgatgcccct
gaagaagaattaactcagtggctacacttctctaatcagatttttagtcgacttgaagac
ctacctgttcctaccgtttctgctatcaatggctatgcccttggcggcggttgcgagtgc
gtacttgctactgattttcgtatttcttctcctgatttacgtatcggtttaccagaaaca
aagcttgggatcatgccgggctttggcggttcagtacgccttcctcgtttgattggtgtc
gataacgcattagaaattattactgctggtaaagatgttgatgcccaaactgcacttaaa
aatggattaacccaagcaattgtccctctagaaaatttaaaagaaagtgctatttcgcta
attgagcaagcaattgaaggcaaaattgattggaaagctgcacgtcatccaaaaacaaca
ccattaagactgacagagcttgaacataaaatgtctttcagtgtggctaaaggtatggtg
atgaaagtagcaggtcctcactatccagcaccgatcaccgcagtaaaaactattgaaaaa
gcggcatttctaaatagagatgaagcactggctatcgaaactgaaaattttgtcaagctc
acacgtaccgatgttgcaaaagccttagtcggtattttccttaatgatcagtatgtcaaa
aatatcacgaaaaaacgtcatgctgaattacctaaacaagcggcggtcttaggcgctggg
ataatgggcggtggaatatcctatcaatctgccttaaaaggtattcccgttgtaatgaaa
gatattaaccaaaaatcccttgagcttggtatgaatgaagcgttaagcctattacaaaaa
cgccaagaaaaaggtcgaatgagtgccgtagatatggcaaaaacgctcgcctctattcaa
cctacattgaattatgcctctgtcagtgatgcggatgttgtggttgaagccgttgttgaa
aatcccaaagtaaaagcaactgtactcgcagaaacagaagcactattaactgatcacgcg
gtacttgcgtcaaatacctctacgatcccaatttccctgctcgcaaaatccttaaagcgc
cctgagaatttctgtgggatgcacttctttaacccagttcatcgaatgccactagttgaa
atcataaaaggtgaaaaaaccagtgaagagacgattaaccgtattgtcagttacgccagt
aaaatgggtaaaacaccgattatcgttaatgattgccctggtttctttgtaaaccgtgtc
ctcttcccttattttgcagggttctctctattactaagagatggtgctgattttcttgct
gtagataaagtgatggaaaaagtatttggctggcctatgggaccagcgtacctacttgat
gttgtaggcattgacacggcaaatcatgctcaagccgtaatggctcagggtttccctgac
agaatgggtacgattgaacgagatgctattgctcttttatatgagcaacagcgatatggt
cagaaaaataatcatggtttctataattacacagttgataaacggggtaaaaagcagaaa
tctgttgatggtcaaattcaaacgcttattcagcaaaatgctggcaaaacacaagagttt
agccaagatgtaattatcgctcgtatgatgatcccgatgatcaatgaagttatccgttgt
ttagatgaaggtattattgcttcaccagcagaagctgatattgcattagtttatggctta
ggcttcccacctttccgaggaggcgtcttccgttatcttgataccatcggattagcgcaa
tttgttgcagatgcacagcaatacgcatcattaggatctctttatcaaattcctgaaagc
ttaaaacagaaagcgcaacgcaacgaaacctattatccaaagcccgcaaaagtagatgtt
aacatcagagaactcgcttaa
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