Proteus columbae: F1325_03230
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Entry
F1325_03230 CDS
T06419
Symbol
sbcD
Name
(GenBank) exonuclease subunit SbcD
KO
K03547
DNA repair protein SbcD/Mre11
Organism
pcol
Proteus columbae
Brite
KEGG Orthology (KO) [BR:
pcol00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pcol03400
]
F1325_03230 (sbcD)
DNA repair and recombination proteins [BR:
pcol03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
F1325_03230 (sbcD)
Archaeal homologous recombinant proteins
F1325_03230 (sbcD)
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GFIT
Motif
Pfam:
Metallophos
SbcD_C
Metallophos_2
FBPase_2
PRORP
EDS1_EP
Motif
Other DBs
NCBI-ProteinID:
QHN09532
UniProt:
A0A6I7D6H1
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Position
complement(688271..689500)
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AA seq
409 aa
AA seq
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MRIIHTSDWHLGQYFFTKTRAKEHQQFLDWLLAQIKHYQVDALIVAGDIFDTGSPPSYAR
ELYNRFVVAIRDTQCQLVILGGNHDSVATLNESKSLLACLNTTVIANVHAETPQAPLILP
KKDNTPGALLCAIPYLRPRDMISSKSGQSGAEKQTALKEAIAEYYQAQYQAALELRQQLN
VDIPIIATGHLTTIGASVTDSVREIYIGTLEAFSATLFPEFDYIALGHIHRPQVVNKSGH
IRYSGSPIPLSFDECGQQKSICLIDFEQEKLTNLTLLPIPEFQLLRTISGSLKEIAIQLE
DLKKQYGEIDTTIWLDIEVSTQDYLSDIQTRIQELTNDPLFDVILLRRARKQRQAFTQNE
NETLTELTVYDVFERRLEQHEFDSEETKTRLTTLFKQAVEMAEKEDNEA
NT seq
1230 nt
NT seq
+upstream
nt +downstream
nt
atgcggattattcacacatcagactggcatttagggcaatatttttttactaagactcga
gctaaagaacaccaacagtttcttgattggttattagcacaaattaaacattaccaagtt
gatgctctgattgttgcgggtgatatttttgatactggctcccctccaagctacgcccga
gagctttataaccgttttgttgttgctattagagatacacaatgtcagctcgttattcta
ggtggtaatcacgattcggtggcaacactaaatgaatcaaaatcactgttggcatgttta
aatacgaccgttattgccaatgttcatgctgaaacaccacaagctccgttaattcttcct
aaaaaagataacactccaggagcattactttgtgcaatcccttatctacgccctagagac
atgatcagcagtaaaagtgggcaatcaggtgctgaaaaacaaacagccttaaaagaagcg
attgctgaatattatcaagctcaatatcaagcagctctcgaattacgtcagcaattaaat
gtcgatattcccattattgcaacgggtcatctcaccacgattggagcgagtgtgacagat
tccgtccgtgaaatttatatcggcaccttagaagccttttcagcaaccctatttcctgaa
tttgactatattgcccttggtcatattcatcgccctcaagtggtgaataaatcaggtcat
attcgttatagcggctctcctattccgttaagttttgatgaatgtggacaacagaaaagt
atctgccttatcgattttgagcaagaaaaattaactaacctcacactattacctattcct
gaatttcagttactacgcactatcagtggttcattaaaagaaatagcgatacaacttgag
gatttaaaaaaacaatacggtgaaatagataccactatttggttggatatcgaagtttca
acacaagattatctcagtgatatacaaacccgtattcaagagctaactaacgatccgctt
tttgatgtgatcttattaagaagagcgagaaaacaacgccaagcgttcactcaaaatgag
aacgaaacactgaccgaattaaccgtttatgatgtttttgaaagacgtttagaacagcat
gagtttgattcagaagaaactaaaactcgtttaacaacattatttaaacaagcagttgaa
atggcagagaaagaggataacgaagcataa
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