Proteus columbae: F1325_05530
Help
Entry
F1325_05530 CDS
T06419
Symbol
rhlE
Name
(GenBank) ATP-dependent RNA helicase RhlE
KO
K11927
ATP-dependent RNA helicase RhlE [EC:
5.6.2.7
]
Organism
pcol
Proteus columbae
Pathway
pcol03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pcol00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
F1325_05530 (rhlE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pcol03019
]
F1325_05530 (rhlE)
Enzymes [BR:
pcol01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
F1325_05530 (rhlE)
Messenger RNA biogenesis [BR:
pcol03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
F1325_05530 (rhlE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
UvrD-helicase
UTP25_NTPase-like
AAA_22
HI1480
Motif
Other DBs
NCBI-ProteinID:
QHN09948
UniProt:
A0A6I7DA70
LinkDB
All DBs
Position
1188184..1189599
Genome browser
AA seq
471 aa
AA seq
DB search
MTDFTSLGLSEALLRAIDEQGYKTPTPIQQQAIEPILAGKDVLASAQTGTGKTAAFTLPI
LEKLSQSAVKTKGRQPVKALILTPTRELAAQIAENVKAYSRYIPIRSLVVFGGVSINPQM
MKLRGGVDVLIATPGRLLDLEHQNAVDLSRVEVLVLDEADRMLDMGFIHDIRRVINKLPK
KRQNLLFSATFSKEITGLANSLLNNPVSISVAPKNSAAESVDQYVHLVDKKRKTELLSHL
IGLENWPQVLIFTRTKHGANKLAEHLNADGIKSAAIHGNKSQGARTRALADFKDGKLKAL
VATDIAARGLDIDQLPYVVNFELPQVAEDYVHRIGRTGRAAATGKAISLVCVDEHGLLAD
IERLLKREIPRLALEGYDPDPSIKAAPLHKKSKNNAPRRSGGRADIRGKDNRNNSRKEGD
SEGKESGRNKSKENYRNKDGSRTGKLGPRRSRKSDEGSDNQSPWSKARKEF
NT seq
1416 nt
NT seq
+upstream
nt +downstream
nt
ttgaccgattttacatcgcttggtttaagtgaggcgcttctccgcgctattgatgaacaa
gggtataaaaccccaacccctattcaacagcaggcgattgagccgattttggcgggtaaa
gacgtattagcgagtgcgcaaacaggcacaggtaaaacagcagcttttacattaccaata
ctggaaaagttatctcaatcagcagtaaaaacaaaaggtcgtcaaccagttaaagcgctg
attttgacaccaacgcgcgagcttgcggctcaaattgctgaaaacgtaaaagcgtatagc
cgttatattcctattcgttcgttagtcgtttttggtggtgtgagcattaatccacaaatg
atgaagttacgtggtggtgttgatgtactgattgcaactcctggacgtttactcgatctt
gaacatcaaaatgcggttgacctttctcgcgttgaagttttagtgcttgatgaagctgat
cgtatgttagacatgggttttatccacgatattcgccgtgtgatcaataaattaccgaaa
aaacgtcaaaacttactgttttcagcgacgttctctaaagagatcacgggtcttgctaat
tcactattaaataaccctgtgagtatttcagttgcgccaaaaaactcggctgctgaatct
gttgatcaatatgttcatttagtggataaaaaacgtaaaacagagttgttatcacactta
attggcttagaaaattggccacaagtgcttatttttacacgtactaaacacggggcgaat
aagcttgctgaacatttaaatgccgatggtattaaatcagctgctattcatggcaataaa
agccaaggtgcgagaacgcgtgctttagctgactttaaagacggcaaattaaaagcgtta
gtagcaacagatattgcggctcgaggtcttgatatcgaccaactgccttatgtggtcaat
tttgaattaccgcaagtggcagaagattatgttcaccgtattggtagaacgggtcgtgct
gctgcaacgggtaaggctatttcacttgtttgtgttgatgaacatggtttattagctgat
attgaacgtctattaaaacgtgaaattccacgtttagcattagaaggttacgatcctgat
ccttcaattaaagcggctcctttacataaaaaatcaaagaataatgcaccgcgtagaagt
ggtggtcgtgcagatattcgcggtaaagataatcgcaacaatagtcgtaaagagggcgat
agcgaaggtaaagagtctggacgtaataaaagcaaagaaaactaccgtaataaagatggc
tctcgtaccggaaaattagggcctcgccgttcacgtaaaagtgatgaaggtagtgataat
caaagcccttggtcaaaagctagaaaagagttttga
DBGET
integrated database retrieval system
