Proteus columbae: F1325_09450
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Entry
F1325_09450 CDS
T06419
Symbol
ddlA
Name
(GenBank) D-alanine--D-alanine ligase
KO
K01921
D-alanine-D-alanine ligase [EC:
6.3.2.4
]
Organism
pcol
Proteus columbae
Pathway
pcol00470
D-Amino acid metabolism
pcol00550
Peptidoglycan biosynthesis
pcol01100
Metabolic pathways
pcol01502
Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:
pcol00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
F1325_09450 (ddlA)
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
F1325_09450 (ddlA)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
F1325_09450 (ddlA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
pcol01011
]
F1325_09450 (ddlA)
Enzymes [BR:
pcol01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.4 D-alanine---D-alanine ligase
F1325_09450 (ddlA)
Peptidoglycan biosynthesis and degradation proteins [BR:
pcol01011
]
Precursor biosynthesis
Amino acid ligase
F1325_09450 (ddlA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Dala_Dala_lig_C
Dala_Dala_lig_N
ATP-grasp
CPSase_L_D2
ATPgrasp_ST
ATP-grasp_4
RimK
Motif
Other DBs
NCBI-ProteinID:
QHN10677
UniProt:
A0A6I7DD06
LinkDB
All DBs
Position
complement(1954119..1955219)
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AA seq
366 aa
AA seq
DB search
MSKLRVAIIFGGKSTEHQVSLQSAKNIINELDRTKFDLCLIGINEQGQWHEYSETDYLLN
SDNPKTISLSKPLRAVAIIPGSVKNQFISLEDGQALPQIDVVFPIVHGAYGEDGTLQGLL
HMIDMPYVGPNIMSSAACMDKDITKRLLDGAGLAVAPFITIMAHQINDIPYNEMVRQLGL
PLFIKPANLGSSVGISKVNNEEEFNAALAMAFEYDLKVIVESAIVGREIECAVLGNEDPE
VSPCGEIVLNDAFYAYNTKYIDEDGAKVVVPAVMEENTSVNIRQVALKAYRVLNCLGMAR
VDVFLTQDNRVVINEINTLPGFTNISMYPKLWQSAGLGYQSLITKLIELALDHHRKTAVL
KTKCEL
NT seq
1101 nt
NT seq
+upstream
nt +downstream
nt
atgagtaaattaagagtcgctattatttttggtggtaaatccacagaacatcaagtttca
ttacagtcagcaaaaaacattattaatgaattagatcgaacgaaattcgacctttgctta
atcggtattaatgaacaaggtcagtggcatgaatattcagaaactgattatttactaaat
agcgataatcctaaaactatttcattaagcaaacctttaagagcggttgctattattcct
ggtagtgtaaaaaaccaatttatttcacttgaagatggccaggcactacctcaaattgat
gttgtattcccaattgtccatggtgcgtacggtgaagatgggacgctccaaggcttatta
cacatgattgatatgccttatgtaggaccaaatatcatgagttcagcagcttgtatggac
aaagatattactaaacgcctacttgatggtgccggattagcggttgcgccatttattact
attatggcgcatcaaattaatgatattccttacaatgaaatggttcgtcaattaggactt
cctttatttattaagcctgcaaacctaggttcttctgtaggaattagcaaagttaataat
gaagaagaattcaacgctgcattagcaatggcttttgaatacgatcttaaagtgattgtt
gaaagtgctattgtaggtcgtgaaatagagtgtgctgttttaggtaatgaagatccagaa
gttagcccttgtggtgaaattgtattaaacgatgctttctatgcctataacacaaaatat
atcgatgaagacggtgctaaagtcgttgtcccagcggtaatggaagaaaatacgagtgtg
aatattcgccaagttgcattaaaagcataccgtgttcttaattgcttaggtatggctcgt
gtagatgtgttcttaacgcaagataatcgtgttgtgatcaatgaaataaacacactacct
ggttttaccaatattagtatgtatcccaaattatggcagagtgcaggtttaggctatcaa
tcattaattactaaattaattgagttagcactagatcaccatagaaaaacagctgtttta
aaaacgaagtgtgaactttaa
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