Proteus columbae: F1325_09955
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Entry
F1325_09955 CDS
T06419
Name
(GenBank) ribonuclease D
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
pcol
Proteus columbae
Brite
KEGG Orthology (KO) [BR:
pcol00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pcol03016
]
F1325_09955
Enzymes [BR:
pcol01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
F1325_09955
Transfer RNA biogenesis [BR:
pcol03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
F1325_09955
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
RNAseD_HRDC_C
HRDC
DUF2683
Motif
Other DBs
NCBI-ProteinID:
QHN10768
UniProt:
A0A6I7DCK5
LinkDB
All DBs
Position
complement(2076951..2078069)
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AA seq
372 aa
AA seq
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MNYQLITTDTALDTACKAASEASQIALDTEFVRIRTYYPHLGLIQMYDGKQISLIDPLAI
KDWAPFVELLTNSDIMKFLHAGSEDLEVFSHQFGCVPTPMIDTQVVAAFLGHPISCGFAT
LVEKYENVALDKSESRTDWLARPLTEKQCQYASGDVFYLLPLAEKLIKEAEEAGYMDAIA
DECNMIAERRQETVVPELAYRDISNAWQLKGQQLACLQMLAQWRLNQAKSRDMALNFVVR
EEHLWSVARYFPSSLAELDALSLSGQEIRCHGRRLLDFVAKAKEIKDEDCPEPIGNLIEQ
PNYKKAFKAIKSVIQEISEDKRYNPELLASRRQINQLLSVHWKIKEGQPELTSRWRKALL
EEKVTEILAQYS
NT seq
1119 nt
NT seq
+upstream
nt +downstream
nt
ttgaattatcaattgattacgacagacactgcattagataccgcctgtaaagccgcttct
gaggcttcacaaatagctttagatacagagtttgtccgcatacgaacctattacccacat
cttggtttgatccagatgtatgacggtaagcagatctctcttattgatccgttagcaatt
aaggattgggctccttttgttgagctactaacaaactcagacattatgaagtttctccat
gcgggaagtgaagatctcgaagtcttttctcaccagtttggctgtgttccaacacctatg
attgacactcaagttgttgctgcattcttaggtcatcccatttcttgtggttttgcgaca
ttagtcgagaaatacgaaaatgttgcactcgataaaagtgaatctcgaacagattggcta
gcgcgacctttaactgaaaaacagtgccaatatgccagtggtgatgttttctatttgcta
cctttagctgaaaaattaattaaagaagctgaagaagcaggctatatggatgccattgca
gatgaatgcaacatgattgcagaacgtcgacaagaaacggttgtaccagagcttgcttat
cgtgatattagcaatgcatggcaattaaaaggccaacagctagcatgcttacaaatgctt
gctcagtggcgtttaaatcaagctaaatctcgtgatatggcattaaacttcgttgtaaga
gaagaacatttatggtctgttgctcgttattttccttcatcactagcagaattagatgcg
ttatcgctttctggtcaagaaattcgttgtcatggtcgtcgcttattagattttgttgct
aaagcaaaagaaattaaagatgaagattgcccagagcctattggcaatttaattgaacaa
ccaaattataaaaaagcgtttaaagcaatcaaatcggttattcaagaaattagtgaagat
aagcgttataaccctgaattattagcctcaagaagacaaataaatcaattattgagtgtt
cattggaaaataaaagaagggcaacctgagctcacttcgcgctggcgtaaagccttatta
gaagaaaaagtcactgaaattttggcacaatattcctaa
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