Proteus columbae: F1325_09960
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Entry
F1325_09960 CDS
T06419
Symbol
fadD
Name
(GenBank) long-chain-fatty-acid--CoA ligase FadD
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
pcol
Proteus columbae
Pathway
pcol00061
Fatty acid biosynthesis
pcol00071
Fatty acid degradation
pcol01100
Metabolic pathways
pcol01212
Fatty acid metabolism
pcol02024
Quorum sensing
pcol04146
Peroxisome
Module
pcol_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
pcol00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
F1325_09960 (fadD)
00071 Fatty acid degradation
F1325_09960 (fadD)
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
F1325_09960 (fadD)
09145 Cellular community - prokaryotes
02024 Quorum sensing
F1325_09960 (fadD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
pcol01004
]
F1325_09960 (fadD)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pcol04147
]
F1325_09960 (fadD)
Enzymes [BR:
pcol01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
F1325_09960 (fadD)
Lipid biosynthesis proteins [BR:
pcol01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
F1325_09960 (fadD)
Exosome [BR:
pcol04147
]
Exosomal proteins
Exosomal proteins of breast milk
F1325_09960 (fadD)
Exosomal proteins of breast cancer cells
F1325_09960 (fadD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
AMP-binding_C_2
Motif
Other DBs
NCBI-ProteinID:
QHN10769
UniProt:
A0A6I7D4L8
LinkDB
All DBs
Position
complement(2078168..2079856)
Genome browser
AA seq
562 aa
AA seq
DB search
MEKVWLKRYPADVPAEIDPDRFASLAEMLENAVANYADQPAFINMGEVMTYRKLEERSRA
FAAYLQNGLGLKKGDRVALMMPNLLQYPIALFGILRAGMVVVNVNPLYTPRELEHQLNDS
GANAIVIVSNFAHTLEKIVFNTSIKHVILTRMGDQLSRPKATLVDFVVKYIKRLVPKYNL
PDAISFRRAMHFGYRMQYIKPEITGSDLAFLQYTGGTTGIAKGAMLTHRNMLANLEQAKA
AYVPALNVGKELVVTALPLYHVFALTVNCLLFIEIGGKNLLITNPRDVKGTIKELGRYPV
TAITGVNTLFNAWLQNPEFRQLDFSKLNLSVGGGMPVQSSVAKEWEELTGKHLLEGYGLT
ECSPLVTGNPYNLKKYSGSIGLPVPSTDVKFMDDEGNEVDRTVGGEMWVRGPQVMKGYWN
RPDATDEVLHDGWVATGDIATMDDEGFIRIIDRKKDMILVSGFNVYPNEVEEVVTAHPKV
LESAAIGVPSKNSGEAVKVFIVKKDPSLTEDEIKTHCRRYLTGYKVPKIIEFRDELPKSN
VGKILRRELRNEEKELKTSTES
NT seq
1689 nt
NT seq
+upstream
nt +downstream
nt
ttggaaaaagtctggcttaaacgttatccggcagatgttccggctgaaattgacccggac
cgttttgcatcccttgctgagatgcttgaaaacgctgtcgcaaattacgcagatcaaccc
gcctttatcaatatgggcgaggtcatgacttatcgcaaacttgaagagcgtagccgtgct
tttgcagcatacctgcaaaacggcttaggattaaaaaaaggtgatcgtgttgccttaatg
atgcccaatttactgcaatatcctatcgcgcttttcggtattcttcgtgcgggcatggtt
gtcgtaaacgtaaacccactttacacaccaagagaacttgaacatcaattaaatgacagt
ggtgcaaatgccattgtaatagtctctaactttgcgcatacgctcgaaaaaatcgtattt
aataccagtattaaacacgttattttaacccgaatgggtgatcagctatctcgtcctaaa
gcaacattagtcgactttgttgttaaatatatcaaacgattagtgcctaaatataacttg
cctgatgccatttcattccgtagagcaatgcattttggttatcgtatgcaatatatcaaa
cctgaaattacaggaagtgacctagctttcttgcaatacacagggggaacaacaggtatt
gctaaaggtgctatgttaacgcaccgcaatatgttggcaaatcttgagcaagcaaaagcg
gcttatgtacctgcactaaatgtaggtaaagagctggtggttacagcgttaccgctatat
cacgtttttgctttaaccgtaaactgtctgctctttattgaaattggtggtaaaaattta
cttattaccaaccctcgtgatgtgaaaggcacaattaaagagctaggacgttaccctgtc
acggcaattactggcgtaaatactttatttaatgcttggttacaaaatccagaattccgt
cagcttgatttttccaaactaaacctctctgttggcggtggtatgcctgttcaaagtagt
gttgctaaagagtgggaagagttaacgggtaaacatttgttagaaggttatggcttgact
gaatgttctcctttagtcacaggtaacccttataatttgaaaaaatacagtggtagtatt
ggattacctgtaccttcaacggatgtgaagtttatggatgatgaaggtaacgaagttgac
cgcactgtaggcggtgaaatgtgggttcgtggccctcaagtaatgaaaggttattggaat
cgtcctgatgcaacggatgaagttttacatgatggttgggttgcaactggtgatattgct
acaatggatgacgaaggctttattcgtatcattgatcgcaaaaaagatatgatcttagtt
tcaggctttaatgtataccctaatgaagtcgaagaagttgtcacggcgcatcctaaggtt
ttagaatcagctgcaattggcgtaccgagtaaaaactcaggtgaagcagttaaagttttc
attgtgaaaaaagatccatcattaacagaagatgagataaaaacacactgtcgtcgttac
ctaacaggttataaagtacctaaaattattgagttccgcgatgaattaccaaaatcaaat
gttggtaaaattttacgcagagagttaagaaatgaagaaaaagagttgaaaacctcaact
gaatcttga
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