Proteus columbae: F1325_10915
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Entry
F1325_10915 CDS
T06419
Symbol
xseA
Name
(GenBank) exodeoxyribonuclease VII large subunit
KO
K03601
exodeoxyribonuclease VII large subunit [EC:
3.1.11.6
]
Organism
pcol
Proteus columbae
Pathway
pcol03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
pcol00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
F1325_10915 (xseA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pcol03400
]
F1325_10915 (xseA)
Enzymes [BR:
pcol01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.6 exodeoxyribonuclease VII
F1325_10915 (xseA)
DNA repair and recombination proteins [BR:
pcol03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
F1325_10915 (xseA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_VII_L
tRNA_anti_2
tRNA_anti-codon
DUF1508
Motif
Other DBs
NCBI-ProteinID:
QHN10943
UniProt:
A0A6I7D9E0
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All DBs
Position
2279662..2281044
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AA seq
460 aa
AA seq
DB search
MTLLINNNIFTVSRLNKTVRQLLEMEMGRIWISAEISNFTQPSSGHWYFTLKDTNAQIRA
AMFRGQNTKVTFRPQHGQQVLVRATITLYEPRGDYQLIVESMQPAGDGLLQQQFELLKQK
LSAEGLFDAIYKKPLPSPAKQIGVITSSTGAALHDILNILRRRDPSLPVLIYPTAVQGAE
APMQIVHAIELANRRKECDVLIVGRGGGSLEDLWAFNDERVARAIFASEIPIVSAVGHET
DVTIADFIADLRAPTPSAAAELISRNKLELLRQLQSQQQRLEMAMDYYLAKKLRAITQLH
HRLQQQHPHLRLARQQNVLASTQQRLVTSFQRLLQTKQHQQTQLQKRLNYQEPSSKIQAL
LRQQQQLIYRMRESISLQLSRQREQFAISCSRLESVSPLATLSRGYSISETESGEVLKNT
KQVKVGDPLKTRVEDGWITSEVIKTQKIRAKRKAAPKSDD
NT seq
1383 nt
NT seq
+upstream
nt +downstream
nt
atgacactactgataaacaataatatttttactgttagccgtctaaataagaccgttcgc
cagttattagaaatggaaatgggtcgcatttggatcagtgctgaaatttccaattttact
caaccctcttctggtcactggtattttacgttaaaggatactaatgcccaaattagagca
gcgatgttccgtgggcaaaatactaaagttacttttcgccctcagcatggtcagcaggtt
ttagttcgcgcaaccattacactgtatgagccacgaggcgattaccaattgattgttgag
agtatgcaacctgctggtgacggactcttacaacaacaatttgagctattaaaacaaaaa
ctcagtgcagaagggttatttgatgcaatttataaaaaacccctgccatctcccgctaaa
cagattggtgttatcacttcatcaacaggagcagcactacacgacatcttaaatattctt
cgtcgtcgtgatccttctttgccagtgcttatctacccaaccgctgttcaaggtgctgaa
gcacctatgcaaattgttcatgccatcgaacttgctaaccgccgtaaagagtgtgatgtt
ttaattgttggtcgtggtggcggttcgttagaagatctctgggcatttaatgatgaacgc
gttgctcgtgctatttttgccagtgaaattccgattgtaagtgctgttggtcatgaaacc
gatgtgaccattgctgattttattgccgaccttagagcaccaaccccttctgctgcggca
gagcttattagtcgtaacaaacttgagttattgcgccaattacaatcgcaacaacaacgc
cttgaaatggcgatggattactatttagcaaaaaaattacgcgcaataacacagcttcat
catcgtttgcagcaacagcatcctcatttacgtcttgctcgtcagcaaaatgtattagct
tccacacaacagcgtttagtgactagttttcagcgactattgcaaaccaaacaacatcaa
caaacacaactacaaaaacgccttaattaccaagaacctagttcaaaaatccaagcatta
cttcgccaacaacagcagttgatttaccgtatgagagaaagtatttcactacagttatct
cgtcaacgtgaacaattcgctattagctgttcacgattggaaagtgtgagtcctctcgca
acactttctcgtggttacagtattagcgaaacagagtctggagaagtgctaaaaaatacc
aaacaagtgaaagtgggtgatccgttgaaaacacgcgttgaagatggttggatcaccagt
gaagtgattaaaacacaaaagataagagctaaacgtaaagcagcacctaaaagtgacgat
taa
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