Proteus columbae: F1325_12260
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Entry
F1325_12260 CDS
T06419
Symbol
gyrA
Name
(GenBank) DNA topoisomerase (ATP-hydrolyzing) subunit A
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
pcol
Proteus columbae
Brite
KEGG Orthology (KO) [BR:
pcol00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pcol03032
]
F1325_12260 (gyrA)
03400 DNA repair and recombination proteins [BR:
pcol03400
]
F1325_12260 (gyrA)
Enzymes [BR:
pcol01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
F1325_12260 (gyrA)
DNA replication proteins [BR:
pcol03032
]
Prokaryotic type
DNA Topoisomerases
F1325_12260 (gyrA)
DNA repair and recombination proteins [BR:
pcol03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
F1325_12260 (gyrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
Beta-prop_ELP1_1st
Motif
Other DBs
NCBI-ProteinID:
QHN11186
UniProt:
A0A6I7D5V5
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Position
complement(2551979..2554606)
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AA seq
875 aa
AA seq
DB search
MSDIAREITPVNIEEELKSSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMNVLGNDWN
KPYKKSARVVGDVIGKYHPHGDIAVYETIVRLAQPFSMRYMLVDGQGNFGSVDGDSAAAM
RYTEVRMAKIAHELLADLEKETVDFVPNYDGTEHIPAVMPTRIPNLLVNGSSGIAVGMAT
NIPPHNLGEVIDGCLAYVDNEDITIEELMEHITGPDFPTAAIINGRRGILDAYRTGRGKI
YIRAQADIETDEKTGRETIIVTEIPYQVNKARLIEKIAELVKDKRIEGISGLRDESDKDG
MRIVVEIKRDAVGEVVLNHLFSQTQMQVSFGINMVALHQGQPKLLNLKEIISAFIRHRRE
VVTRRTIFELRKARDRAHILEALAVALANIDPVIEMIRQAPNPAEAKAALIAQPWDLGSV
STMLERAGDSNVARPEWLEPQYGVHDGKYYLTEQQAQAILDLRLQKLTGLEHEKLLDEYR
ELLLQIAELLHILRSPERLMEVIREELNAIKEQYNDPRRTEITENTADINIEDLINEENV
VVTLSHQGYVKYQPLTDYEAQRRGGKGKSAARIKEEDFIDRLLVANTHDTILCFSSRGRL
YWMKVYQLPEASRGARGRPIINLLPLEQNERITAILPVREYEEGKFVFMATASGTVKKTP
LQDFSRPRSAGIIAVNLNEGDELIGVDLTDSTNEVMLFSADGKVVRFAEDCVRPMGRTAT
GVRGMKLSDDDKVVSLIIPRGEGDILTVTENGYGKRTAQSEYPTKNRATQGVISIKVSER
NGKVVGAIQVEETDQIMMITNAGTLVRTRVSEVSIVGRNTQGVTLIRTTEGELVVGLQRV
EDEDDALDDDEVNEVINEELSEAPDSDLADDADEE
NT seq
2628 nt
NT seq
+upstream
nt +downstream
nt
atgagcgacattgccagagaaatcacaccagttaatatcgaagaagagctgaaaagctca
tatttggattatgcgatgtctgttattgtaggacgcgcattacccgatgttcgagacgga
ctgaagccagtacaccgccgagtacttttcgcgatgaatgtactaggaaacgattggaat
aaaccttataaaaaatcagcccgtgttgttggggatgttatcggtaaatatcacccgcac
ggtgacattgctgtttatgaaacgattgttcgtttagcacagcctttttctatgcgttac
atgttggttgacgggcagggtaacttcgggtcagttgatggtgactcggcggctgcgatg
cgttataccgaagttcgtatggcgaaaatcgcccatgaactgctggcggatttggaaaaa
gaaacggttgattttgttcctaactatgatggaacagaacatattccggcagtaatgcca
acccgtattccaaacttgttagtcaatggttcttcagggattgcggtagggatggcaaca
aacattcctccacataacctaggcgaagttatcgatggctgtcttgcttacgttgataac
gaagacatcacgattgaagagttgatggaacatattacggggcctgatttcccgactgcc
gctattattaatggtcgcagaggaattttagatgcttaccgtactggtcgcggaaaaatt
tatatccgtgctcaggctgatatcgaaactgatgagaagacaggccgcgaaactattatc
gtgacagaaattccttatcaggtgaataaagctcgcttaattgaaaaaattgcagagctt
gttaaagataagcgtattgaaggtattagcggcttacgtgatgagtctgataaagacggt
atgcgtattgtcgttgaaatcaaacgtgatgctgtgggtgaagtggtattaaatcactta
ttctcacaaacacaaatgcaggtttcttttggtattaatatggttgcgcttcaccaaggc
cagccaaaattattaaatttaaaagaaattatctctgcctttattcgtcatcgtcgtgaa
gttgttactcgtcgtactattttcgaattacgtaaagcacgcgaccgcgctcatatctta
gaagcactggctgttgccttggcgaacattgacccagttattgaaatgatccgtcaagca
ccaaatccagcagaagcaaaagcggcgttaattgcacaaccttgggatttaggtagcgtt
tctaccatgttagagcgtgctggtgacagcaatgttgctcgtcctgaatggttagagcca
caatatggtgtgcatgacggtaagtactatctaacagagcaacaagctcaggctattttg
gatctgcgtttgcagaaactgaccggccttgaacatgaaaaactgttagatgaatatcgt
gagttattactccaaattgctgagctattgcatatcttaagaagcccagagcgtctgatg
gaagtcattcgtgaagagctaaatgcgattaaagagcaatataacgatcctcgtcgtact
gagatcactgaaaatacagcagatattaatatcgaagacttgatcaatgaagaaaatgtt
gttgtgacactttctcatcaaggttacgttaaatatcagccacttaccgattacgaagca
cagcgtcgtggtggtaaaggtaaatcagcagcaagaattaaagaagaagactttatcgat
cgtctgttggtagctaacacccatgacaccattctgtgcttctcaagccgtggtcgtctc
tactggatgaaagtttaccagttaccagaagcaagtcgcggtgctcgtggtcgcccaatt
atcaacttattacctcttgagcaaaatgaacgtattacggctattttgccagtgagagag
tatgaagaaggtaagtttgtctttatggcaacagcaagcggcaccgtgaagaaaacacct
ctgcaagatttcagccgtcctcgtagtgcaggtattattgccgtcaacttaaatgaaggt
gatgagttaatcggtgttgatttaaccgacagcactaacgaagttatgttgttctctgcg
gatggtaaagtggttcgctttgcagaagattgtgttcgcccaatgggacgtactgcgact
ggtgttcgtggtatgaaactgagcgatgacgataaagtggtttcacttatcatccctcgt
ggtgaaggtgatatcttaaccgtaactgaaaatggttatggtaaacgtactgctcaaagc
gaatacccaacgaagaatcgtgcaacacaaggcgttatctctattaaagtcagtgagcgt
aacggtaaagttgttggtgcaattcaagttgaagaaactgaccagattatgatgatcacg
aatgcgggtacattagttcgtacacgagtttctgaagtcagcattgttggacgtaataca
caaggtgttaccttaattcgtacaaccgaaggtgagttggtcgttggcttgcaacgtgtt
gaagatgaagatgatgcattagatgacgatgaagttaatgaagttattaacgaagagtta
tcagaagcacctgattcagatttagcggacgatgcagacgaagaataa
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