Proteus columbae: F1325_13460
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Entry
F1325_13460 CDS
T06419
Symbol
recJ
Name
(GenBank) single-stranded-DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
pcol
Proteus columbae
Pathway
pcol03410
Base excision repair
pcol03430
Mismatch repair
pcol03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pcol00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
F1325_13460 (recJ)
03430 Mismatch repair
F1325_13460 (recJ)
03440 Homologous recombination
F1325_13460 (recJ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pcol03400
]
F1325_13460 (recJ)
DNA repair and recombination proteins [BR:
pcol03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
F1325_13460 (recJ)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
F1325_13460 (recJ)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
F1325_13460 (recJ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DHH
RecJ_OB
DHHA1
Glyco_transf_4
Toprim_2
Motif
Other DBs
NCBI-ProteinID:
QHN11400
UniProt:
A0A6I7DDB6
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Position
complement(2809199..2810932)
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AA seq
577 aa
AA seq
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MVTIEPTLRRRIAQVTQLPDHLDPLLRQIYANRGITSEVQLERSLKGLLHYQALTGIETA
ISLLIDALQQQSRIVIVGDFDADGATSTALAIKALRQMGFKQVNYHIPNRFDDGYGLSPQ
VVHDVAKKGVDLIITVDNGISSFEGVDAAHEYGIRVLVTDHHLPGQTLPAADAIINPNLT
DCSFLSKSLAGVGVTFYLMTALRAELEKQGWFKQQNLARPNMADFLDLVALGTVADVVPL
DENNRIFVYEGLRRIRAGRCCVGIKALTEVSRKELSQLVSSDLGFSLGPRLNAAGRLDDM
SVGVALLLTDNIGTAREIANELDGLNQTRREIEAGMQEEASTIFRQFMGTQHDLPNGLAI
YHPEWHQGVVGILASRIKEKLHRPVIAFAPSGDGLLKGSGRSISGVHLRDALERLNTLNP
GLMVKFGGHAMAAGLSLEEDKFPLFQRHFSSLMAELVSDEQLQGVILSDGELTENQLSLP
IAEMLREAGPWGQAFPEPLFDGKFTLLQQRIVGSKHLKMMLQPVNSHLMIDAIAFNVDIN
MWPDNSIKIVELAYRLDVNEFRGQRNAQLLVEHIWPC
NT seq
1734 nt
NT seq
+upstream
nt +downstream
nt
atggtcactattgaaccgacattacgtcgtcgaattgcacaggtaactcaattaccagat
cacttagatcccttattacgacaaatttatgctaatcgtggaataacctctgaagttcaa
ctagaacgatcgttaaaaggcttacttcattatcaagcattaacaggaatagaaacggca
atttcattactgattgatgcattacagcaacaatctcgtattgttattgttggcgatttt
gatgctgatggtgcaacaagtaccgcacttgcgattaaagcattacgccaaatgggattt
aagcaggttaactatcatattcctaatcgctttgatgatggttatggtttaagccctcaa
gttgttcatgacgttgctaaaaaaggggttgatctcattatcactgtggataatggaatt
tcctcttttgaaggtgtagatgcggctcatgaatatggtattcgtgtcctcgttaccgat
caccatttaccaggacaaaccttacctgccgcagatgcgattattaatcctaatctgaca
gattgttcttttttatctaaatcattagcaggtgttggcgttactttttatttaatgacg
gcattaagagctgaattagaaaaacaaggctggttcaagcaacaaaacttagctcgccct
aatatggcggattttctcgatttagttgcactaggcacagtggcagacgttgttcctctt
gatgaaaataaccgtatttttgtttatgaaggattacgccgaattagagctggacgttgt
tgtgtgggtattaaagcgttaacagaagtgtctcgtaaagaactatctcaattggttagt
agtgatttaggtttttctttaggacctcgcttaaatgcagcagggcgcctagatgatatg
tcggtgggggttgctttactcttaactgacaatattggtactgctcgtgaaattgccaat
gaacttgatggattaaatcaaactcggcgtgaaattgaagcgggaatgcaagaagaagcc
tcaaccatttttcgccaatttatgggcactcaacatgatttacctaatggtttagcgata
tatcatcccgaatggcatcaaggcgttgtgggtattttagcctctcgtattaaagagaaa
ttgcatcgtcctgttattgcgttcgcacctagtggtgatggtctgttaaaaggctctggt
cgttcaattagtggcgtacatttgcgagatgccttagagcgattaaatacattaaatccg
ggtttgatggtgaaatttggtgggcatgcaatggcagcagggctttcacttgaagaagat
aaattcccgttatttcagcgtcatttttcgtctttaatggcagagttggtttctgacgag
caattgcaaggcgttattttatctgatggtgagctaacagaaaaccagctatcactacca
attgctgaaatgctaagagaggctggtccgtgggggcaagcttttccagagcctttattt
gacggtaaattcacgttattacagcaacgtattgtgggtagtaagcatttaaaaatgatg
cttcagcctgtaaatagccatcttatgattgatgctattgcctttaatgttgatattaat
atgtggcctgataacagcattaaaatagttgagctagcgtatcgattagatgtgaatgaa
tttagagggcaacgtaatgctcaattgcttgttgagcacatttggccttgttaa
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