Proteus columbae: F1325_14790
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Entry
F1325_14790 CDS
T06419
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
pcol
Proteus columbae
Pathway
pcol03030
DNA replication
pcol03430
Mismatch repair
pcol03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pcol00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
F1325_14790 (dnaE)
03430 Mismatch repair
F1325_14790 (dnaE)
03440 Homologous recombination
F1325_14790 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pcol03032
]
F1325_14790 (dnaE)
03400 DNA repair and recombination proteins [BR:
pcol03400
]
F1325_14790 (dnaE)
Enzymes [BR:
pcol01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
F1325_14790 (dnaE)
DNA replication proteins [BR:
pcol03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
F1325_14790 (dnaE)
DNA repair and recombination proteins [BR:
pcol03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
F1325_14790 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
DNA_pol_IIIA_C
tRNA_anti-codon
Motif
Other DBs
NCBI-ProteinID:
QHN11647
UniProt:
A0A6I7DFP2
LinkDB
All DBs
Position
complement(3137947..3141429)
Genome browser
AA seq
1160 aa
AA seq
DB search
MADPRFIHLRVHSDYSMIDGLAKTGPLVKKVASLGMPAFAITDFTNLCGLVKFYGAAHGA
GIKPIIGADVYLETELLGDEYAHLTILARNNVGYQNLTLLISEAYKHGYGAVGPTIKQEW
LTTYKEGLLLLSGGRMGDVGKFLLRGNRALVDQCLEYYQTHFPDSYYLELIRTGRTDEET
YLHEAVALASEKGLPVVATNDVCFLDSDDFDAHEIRVAIHDGFTLSDPKRPKNYSPQQYM
RTEEEMCELFADIPEALENSVEIAKRCNVTIRLGEYFLPQFPTGDMSTEDFLVKKSKEGL
EERLAFLFPDPEERQKRRPEYDERLDIELQVINQMGFPGYFLIVMEFIQWSKDNGVPVGP
GRGSGAGSLVAYSLKITDLDPLEFDLLFERFLNPERVSMPDFDVDFCMEKRDRVIDHVAE
MYGRDAVSQIITFGTMAAKAVIRDVGRVLGHPYGFVDRISKLVPPDPGMTLEKAFAAEPQ
LPEIYEADEEVKSLIDMARKLEGVTRNAGKHAGGVVISPTKITDFAPLYCDAEGNNPVTQ
FDKSDVEYAGLVKFDFLGLRTLTIINWALEMINARRAKKSLEPVDISAIPLTDQRSFDML
QRSETTAVFQLESRGMKDLIKRLRPDCFEDMIALVALFRPGPLQSGMVDNFIDRKHGVEE
ISYPDVKWQHESLQPVLEPTYGVILYQEQVMQIAQVLAGYTLGGADMLRRAMGKKKPEEM
AKQRSVFEEGAIKNGVDGELAMRIFDLVEKFAGYGFNKSHSAAYALVSYQTLWLKAHYPA
EFMAAVMTADMDNTEKVVGLVDECWRMGLKVLPPDINSGLYHFHVNDEGEIVYGIGAIKG
VGEGPIEAIVEARQQGGHFKDIFDLCARTETKKLNRRVMEKLIMSGAFDKLGPHRAALMS
SLEDALKAADQHAKAEAIGQSDMFGVLAEAPEQVERSYANIPKWPDQVVLEGERETLGLY
LTGHPITRYLKEIERYAAGTRLKDLVPTPRGQMVKVAGLVLASKVFTTKRGNRIGVCTLD
DRSGRLEIMLFSDALDKYQHLLEQDKILIATGQVSFDDFNGGLKMTVRELMDINEAREKY
ARGLAISLSDRQINEQLLNRLRGVLEPHRSGTIPVHLYFEKHDACARLRFGATWRVTPTD
MLLTDLRTLLGNEQVELEFD
NT seq
3483 nt
NT seq
+upstream
nt +downstream
nt
atggcagatcctcgttttatccatcttagggtacacagcgattattcaatgatcgatgga
ttggcaaaaacagggcctcttgtgaagaaagtggcttcgctgggaatgcctgcttttgcg
attactgatttcactaacttatgtgggttagtgaaattttatggtgctgcacatggtgct
ggcattaaacctatcattggtgctgatgtttaccttgaaacagaattattaggtgatgaa
tatgctcatcttactattcttgcccgtaataatgtaggctaccaaaacctcactttattg
atttcagaagcttacaaacacggttatggtgctgttggaccgacgattaaacaagaatgg
ttaacaacctacaaagaagggctcttgttgctttctggcggtagaatgggggatgtgggt
aagttcctacttcgcggaaatcgcgctttagttgatcagtgccttgaatattatcaaact
cattttcccgatagttattatctagagcttattcgtacaggtcgtactgatgaggaaact
tatcttcatgaagcagtagcactggcttctgaaaaaggtctgcccgtcgttgcaaccaat
gatgtctgttttctcgacagtgatgattttgacgcacatgaaattcgtgtcgcaattcat
gatggttttacgttatctgatcccaaacgtcctaagaattatagtcctcagcaatatatg
cgcacagaagaagaaatgtgtgaattatttgctgatatacctgaagcattagaaaacagt
gtcgaaatcgctaaacgctgtaatgtcacgatccgcttaggggaatactttcttccacaa
ttcccaactggggatatgagcacagaagatttcctcgtcaaaaaatcgaaagaaggttta
gaagaacgcttagcctttttatttcccgatcctgaagagcgacaaaaaagacgccctgaa
tatgatgagcgtcttgatattgagctgcaagtgattaaccaaatgggattcccaggttac
ttcctgatcgtgatggaatttattcagtggtctaaagataacggtgttcctgtaggacca
gggcgtggttctggtgctggttcattagtcgcttactcactcaaaatcactgaccttgat
cctcttgaattcgacttacttttcgaacgttttcttaacccagaacgtgtatcgatgcca
gactttgacgtcgatttctgtatggaaaaacgggatagagttatcgaccacgttgctgaa
atgtatggtcgagatgcggtatctcagatcattacatttggtacgatggcggctaaagcc
gttattcgcgatgttggtcgtgttttaggacacccttacggttttgttgatagaatttca
aaactcgttcctcctgatccaggtatgacgctggaaaaagcgtttgcagccgagcctcaa
ttaccagaaatttatgaagccgacgaagaggttaaatctcttattgatatggctcgtaaa
ttagaaggtgtgacgcgtaatgcgggtaaacacgcgggtggtgtcgttatttcaccaacg
aaaatcaccgattttgcgccactttattgtgatgctgagggaaataaccccgttacacaa
tttgataagagcgacgttgaatacgcgggtcttgttaaattcgacttcttaggtttaaga
acactaaccatcattaactgggcattagagatgattaatgcccgacgagctaaaaagtct
ctcgaacctgttgatatttcggcgatcccattaacggatcagcgcagttttgacatgttg
cagcgttcagaaacgaccgcggtattccagttagaatctcgtggtatgaaagatctcatc
aaacgcctacgtcctgactgttttgaagatatgattgcacttgttgccctatttcgtccg
gggccattgcaatcaggcatggtagataactttattgaccgtaaacacggtgttgaagag
atctcatatcctgatgttaagtggcaacatgaaagcttacagcccgttctagaaccaacc
tatggtgttatcctataccaagaacaagttatgcaaattgcacaggtgcttgcgggatat
acactaggtggcgcggatatgttacgacgcgcaatgggtaagaaaaaacctgaagaaatg
gcaaagcaacgctctgtttttgaagagggtgctattaaaaacggtgtcgatggtgagctt
gctatgaggatctttgacttggtggagaaattcgccggttatggatttaacaaatcacac
tcagcagcgtatgcattagtttcttatcaaacattgtggctaaaagcccactatccagct
gaatttatggctgctgtaatgacggcagatatggataacactgaaaaagtggtgggatta
gttgatgaatgttggagaatgggcttaaaggttcttcctcctgatattaatagcggtctt
tatcatttccacgtaaatgatgaaggcgaaatcgtttatggtattggtgccattaaaggt
gtgggtgaagggccaattgaagcgattgtagaggcgcgtcagcaaggcggtcactttaaa
gatatttttgatctctgtgctagaacagaaaccaaaaaattgaatcgccgagtgatggaa
aaactgataatgtcaggcgcattcgataagctgggacctcatcgtgctgctttaatgtct
tcattagaagatgcattaaaagccgcagaccaacatgccaaggctgaagcaataggccaa
tcggatatgtttggtgtgttagctgaagctcctgaacaagttgagcgttcttatgccaat
atacctaaatggccagatcaagtcgttttagaaggtgagcgagagacgttaggtttatat
ttaacaggtcatccgatcacacgttatttaaaagaaattgaacgatatgcggcaggaacg
cgtctaaaagatttagtaccaacacctcgtggtcaaatggtgaaggtagcaggcttagta
cttgcttctaaagtatttacaacgaaacgtggaaatcggatcggcgtttgtaccttagat
gatcgttcaggtcgcttagaaattatgttattttctgatgcattggataaataccaacat
ttattagaacaagacaagattttaattgctactgggcaggtcagctttgatgatttcaat
ggtgggcttaaaatgacagtccgcgaacttatggatatcaacgaagcccgtgaaaaatat
gcacgaggacttgctatctcattatcggacaggcaaattaatgagcaattattaaatcgt
cttcgcggcgttttagaacctcatcgttcaggcacgataccggttcacctttattttgaa
aagcatgatgcctgtgcacgtttacgatttggtgcgacttggcgtgtaacgccaacagat
atgcttttaacggatctgcgaactctgctgggtaatgagcaggtagaattagaatttgac
taa
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