Proteus columbae: F1325_15080
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Entry
F1325_15080 CDS
T06419
Symbol
rapA
Name
(GenBank) RNA polymerase-associated protein RapA
KO
K03580
ATP-dependent helicase HepA [EC:5.6.2.-]
Organism
pcol
Proteus columbae
Brite
KEGG Orthology (KO) [BR:
pcol00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pcol03021
]
F1325_15080 (rapA)
Transcription machinery [BR:
pcol03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
RNA polymerase-associated proteins
F1325_15080 (rapA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RapA_C
Tudor_RapA
Tudor_1_RapA
SNF2-rel_dom
Helicase_C
ResIII
DEAD
Cas3-like_C_2
AAA_34
Bac_DnaA
COG2_N
Motif
Other DBs
NCBI-ProteinID:
QHN11697
UniProt:
A0A6I7DFT7
LinkDB
All DBs
Position
3206970..3209873
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AA seq
967 aa
AA seq
DB search
MPFTLGQRWISDTESELGLGTVVAIDARMVTLLFPACGENRLYSRHDAPITRVMFNAGDT
VTSHEGWKLAIDNVVEDNGLLIYQGVRLDTEEPAQLREVFLDNKLTFNKPQDRLFAGQID
RMDRFALRYRARKFMSEQFKQAQSGLRGIRASLIPHQLYIANEVGKRHNPRVLLADEVGL
GKTIEAGMIIHQQLMDGRAERVLIIVPESLQHQWLVEMLRRFNLRFSLFDDSRYSESLLD
SDNPFETEQMIICSLDFVRKNKQRFEHLVEATWDMLVVDEAHHLVWSEDAPSREYQVIEE
LAESIPSVLLLTATPEQLGQESHFARLRLLDPSRFHDYNEFINEQQKYRPVADAVTILLS
EDDLNTEQQNIISEMISEQDVEPLLKAANTQGEERTKSRQELIHMLMDRHGTGRLLFRNT
RSGVKGFPNRLLHAIKMPLPTQYQTAIKVAEIMAAKKSLEVRAKEMLYPERIYQEFEGEN
ATWWNFDPRVEWLLGFLTANRNEKVLVICAQAATALQLEQVLREREGIRAAVFHEGMSLL
ERDRAAAYFASEEEGAQVLLCSEIGSEGRNFQFANQLVMFDLPFNPDLLEQRIGRLDRIG
QNRDIDISIPYLEGTAQSVLLRWYHEGLDAFEHTCPTGRTIYDSKYDALVNYLAQPNELA
DFDEFIAACRKQHDEMKLKLEQGRDRLLEMHSNGGEVGVELAGEIAAQDNDPELVNFALN
LFDIVGINQEDRSDSLIILTPSDHMLVPDFPGLPQDGCTITFDREQALSREDTQFISWEH
PIIRNGLDLILSGDTGSCAVSLLKNKALPVGTLLVELIYVVEAQAPKHLHLSRFLPATPV
RLLLDLKGNNLASQVEFESFNRQLNAVNRHTSSKLVNAVQSEVHHVLKASEPLMEVEAKG
LIQKAKEEADRVLTHELSRLEALRAVNPNIRDDEVEAIENERAHILNHLDEATWRLDSIR
LIVVTHQ
NT seq
2904 nt
NT seq
+upstream
nt +downstream
nt
atgccttttactcttggtcaacgttggattagcgatactgaaagcgagcttggactgggt
actgttgtggcaattgatgcccgcatggttaccttactttttcctgcctgtggcgaaaac
cgcctttactcccgtcatgatgcaccaataacgcgggtgatgttcaatgcaggggatact
gtcaccagtcacgaaggctggaaactcgccatcgataacgttgtagaagataacggccta
cttatctatcagggtgtacgtttagacactgaagagcctgcacaattacgtgaagtgttc
ttagataacaaactcacttttaataaacctcaagatcgcctttttgcaggtcaaatcgac
cgtatggatcgctttgcattacgctaccgcgctcgtaagtttatgagcgagcagtttaag
caagcacaaagtggtttacgtggtatccgcgcaagccttattcctcatcagctttatatc
gccaatgaagtgggtaaacgtcataacccccgcgtattattagctgatgaagtgggttta
ggtaaaacaattgaagctggtatgattatccatcaacaattaatggatggtcgtgctgag
cgcgtgttgattattgtgcctgaaagcttacaacatcagtggttagttgaaatgttacgc
cgtttcaacctccgtttctcactgtttgatgatagccgttatagcgaatctttattagat
agcgataatccatttgaaacagaacagatgatcatctgctctttagattttgtgcgtaaa
aacaaacaacgttttgaacacttggttgaagcaacatgggatatgttagttgtcgatgaa
gctcatcaccttgtttggagtgaagatgctccaagccgtgaatatcaagtaattgaagaa
ttagctgaatctattccttcggtattgctattaaccgcaacccctgagcaattaggtcaa
gaaagccactttgcccgtttacgtctgcttgatccaagccgtttccatgactacaacgaa
tttattaatgagcaacaaaaatatcgccctgttgctgatgctgtcactattttgctatca
gaagatgatttaaataccgaacaacaaaatatcatcagtgaaatgatcagcgagcaagat
gttgagccattactgaaagcggcaaatacccaaggtgaagaacgtactaaatctcgccaa
gaacttatccatatgctaatggacagacacggaacaggtcgtttgctattccgtaacact
cgttctggcgttaaaggtttcccgaatcgcttacttcacgcgataaaaatgccactgcca
acacaatatcaaaccgcaattaaagtggctgaaattatggcggcgaaaaagagcctcgaa
gttcgtgcaaaagagatgctttaccctgaacgtatttaccaagaattcgaaggtgaaaac
gcaacatggtggaactttgaccctcgtgttgaatggttactgggtttcttaactgcaaat
cgtaatgaaaaagtactggtaatttgtgctcaagcagcaaccgcactgcaattagaacaa
gttttacgtgagcgtgaaggtattcgcgcggcagtcttccacgaaggtatgtcattactt
gaacgcgaccgtgcagctgcttatttcgcgtctgaagaagaaggcgcacaagttctacta
tgttcagaaatcggctctgaaggacgtaacttccagtttgctaatcaactagttatgttt
gatctgccatttaaccctgatttactagaacaacgtattggtcgtctcgatcgaattggt
caaaatcgcgacattgatattagcattccttatcttgaaggtacggctcaatccgtatta
ttgcgttggtatcacgaaggcttagatgcctttgagcatacttgtccaacaggtcgtact
atttatgacagcaaatatgatgctctcgtcaattaccttgcgcaacctaatgaattagcg
gactttgacgagtttatcgctgcttgtcgtaaacagcatgatgaaatgaagctcaaactt
gagcaaggccgcgaccgcctattagaaatgcattctaacggtggtgaagttggcgttgaa
ttagcgggtgagattgcagcgcaagataacgatcctgagttagtgaactttgcactgaac
ttgtttgatatcgtcggtattaatcaagaagatcgcagtgatagcttaattattttaacg
ccatccgatcatatgttagtgcctgatttcccaggattaccgcaagatggttgcaccatc
acatttgatagagagcaagcattatctcgtgaagatacccaatttattagttgggaacac
ccaattatccgtaatggcttagatttaattttatctggcgatacaggaagttgtgccgtt
tctttattaaaaaataaagcattgccagtgggaacgctgttagtagaactgatttatgtg
gtcgaagcgcaagcacctaaacatcttcacttaagtcgtttcttacctgcaacaccagtt
cgcttattacttgatctgaaaggtaataatcttgcatctcaagttgagtttgaaagcttt
aaccgccaattaaatgcagttaatcgtcatacttcgagcaaactggtcaatgcggtacaa
agtgaagtccaccatgtacttaaagcctctgaaccgttaatggaagttgaagcgaaagga
cttatccaaaaagcgaaagaagaagcggatcgcgtgctgactcatgaattgtcgcgctta
gaagctttacgtgcggtaaacccaaatattcgtgatgatgaagtcgaagcaattgaaaat
gaacgtgctcatattcttaaccatttagatgaagcaacgtggcgtttagattcaattcgc
ctcattgttgttacccaccaataa
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