Proteus columbae: F1325_17650
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Entry
F1325_17650 CDS
T06419
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
pcol
Proteus columbae
Pathway
pcol03030
DNA replication
pcol03410
Base excision repair
pcol03420
Nucleotide excision repair
pcol03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pcol00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
F1325_17650 (polA)
03410 Base excision repair
F1325_17650 (polA)
03420 Nucleotide excision repair
F1325_17650 (polA)
03440 Homologous recombination
F1325_17650 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pcol03032
]
F1325_17650 (polA)
03400 DNA repair and recombination proteins [BR:
pcol03400
]
F1325_17650 (polA)
Enzymes [BR:
pcol01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
F1325_17650 (polA)
DNA replication proteins [BR:
pcol03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
F1325_17650 (polA)
DNA repair and recombination proteins [BR:
pcol03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
F1325_17650 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
F1325_17650 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
DNA_polI_exo1
HHH_5
Motif
Other DBs
NCBI-ProteinID:
QHN12157
UniProt:
A0A6I7DH12
LinkDB
All DBs
Position
complement(3773437..3776235)
Genome browser
AA seq
932 aa
AA seq
DB search
MVQIAENPFILVDGSSYLYRAYHAFPPLTNSQGEPTGAMYGVLNMLRSLIIQYKPSHVAV
VFDAKGKTFRDELYEEYKSNRPPMPDDLREQIAPLHEMVQAMGLPLLSISGVEADDVIGT
LALKAAADGRDVLISTGDKDMAQLVTPKITLINTMTNVILGPDEVKEKYGVPPELIIDFL
ALMGDSSDNIPGVPGVGEKTALGLLQGLGSLDDIYQQLDNIATLSFRGAKTLGAKMAEHE
KVAKLSYKLATIKTDVELDKTFDDLVVNEPNLDQLLEMFTRYEFKRWISDLQNGGWLAQR
STHKVAVPYTSEAVNPKEAPVSANFPVITQENYEAVLTHESLARWVELLKKAPAFAFDTE
TDSLNNIDARLVGLSFAIEPGKAAYIPLRHEYLDAPDQLPVNEVLAALKPILEDKNILKI
GQNLKFDRGIMENEGIELNGIHFDTMLESYVLNSVSNRHDMDTLAEKHLNHKTTTFEEIA
GKGKGQLTFNQIEVEQATLYAAEDADITLLLHQALYPQIDAIEPLKHVYRDIEMPLVPVL
SRMERKGVLIDAQVLAVQSQEITQRLAEIEKETFALAGQEFNLSSPKQLQEILFDKLQLP
VIKKTPKGAPSTNEEVLEELAHSHELPRLILEHRGLAKLKSTYTDKLPLMVNSKTKRVHT
SYHQAVTATGRLSSRDPNLQNIPVRNEEGRRIRQAFIAREGFKIVAADYSQIELRIMAHL
SQDKGLLDAFAQGKDIHRATASEVFGIPLEDVTSEQRRSAKAINFGLIYGMSAFGLSQQI
GVERREAQRYMDLYFERYPGVLDYMERTRKQASEQGYVETLDGRRLYLPEINSKNAIRRK
ASEREAINAPMQGTAADIIKKAMIAVDNWICNECPADVHMIMQVHDELVFEVRESYLENA
NIMIHKLMESSMELAIPLKVEVGIGNNWDEAH
NT seq
2799 nt
NT seq
+upstream
nt +downstream
nt
atggtccagatagcagaaaacccctttatccttgtagatggctcttcatacctttatcgt
gcctatcatgcctttccaccgctaactaatagccaaggtgagccaacgggtgcgatgtat
ggtgtgttgaacatgctgcgtagcttgataatacagtataagccaagccatgttgcggtt
gtgtttgacgctaaaggtaaaacattccgtgatgagttgtatgaggaatacaaatctaat
cgtcctccaatgccagatgatctgcgtgaacaaatagcgcctttacatgagatggtgcaa
gcaatgggtttacccttgttatctatttcaggtgtggaagcggatgatgttattggaaca
ttggcactaaaagcagcggctgatgggcgtgatgtcctaataagcaccggcgataaagat
atggcgcaattagtgacgccaaagatcacgctgattaacaccatgaccaacgttattttg
ggtcctgatgaagttaaagaaaaatatggcgttcctcctgaactgattattgatttcctc
gcattgatgggcgattcatcggataacatccctggtgtccctggtgttggtgaaaaaacc
gcactaggtcttttacaagggcttggtagtttagatgatatctatcaacagcttgataat
attgcaacattgagtttccgtggtgctaaaacacttggcgctaaaatggcagagcatgag
aaagtggcaaaactttcttataagttggcaacgattaaaaccgatgttgaactcgataaa
acgtttgatgatttagtggttaatgagccaaatttagatcaattattagagatgttcacg
cgttatgaatttaaacgctggataagtgatcttcaaaatggtggctggttagcacaacgc
agtacacacaaagttgcagtgccttacacctcagaagccgttaaccccaaagaagcacct
gtatcagctaattttcctgttattacacaagagaattatgaagctgtcttaacgcatgaa
agtctggcgcgatgggttgagcttctcaaaaaagcacctgcatttgcattcgatacagaa
acggatagcttaaataatattgatgctcgtttggtgggattatcatttgctattgagccg
ggtaaagctgcttatattccactacgtcatgagtatttagatgcgccagaccaacttcct
gttaatgaagtgctagcggcattaaaacccattttagaagataaaaatattttaaaaatt
gggcaaaacttgaagtttgatcgtggcattatggaaaatgaaggtatcgaattaaacggt
attcattttgatacgatgttggagtcttacgtattaaatagcgtgagtaatcgacatgat
atggatactttggctgaaaaacatttaaaccataaaaccacgacatttgaagagatcgcg
ggtaaaggtaaaggtcaactcacctttaaccaaattgaggttgagcaagcgacgttatat
gcggctgaagatgccgatatcactttattactccatcaagcgctatatcctcaaatagac
gctattgagcctcttaagcatgtttaccgcgatatcgaaatgccattagttcctgtgctt
tctagaatggaacgcaagggagtattaattgatgctcaagtgttagctgttcaatctcaa
gaaattacacaacgtttggctgaaattgaaaaagagacgtttgcgttagctggacaagag
tttaatctctcttcacctaagcagttacaagaaattttatttgataaattgcaattgcca
gttatcaagaaaaccccgaaaggggcgccatctaccaatgaagaagtattagaagaatta
gcacatagccatgaattacctcgcttaatcttagagcatcgtggtcttgcgaaactgaaa
tctacctatactgataaattaccattaatggtaaatagtaagacgaagcgtgtacatact
tcatatcatcaagcagtgacggcaacggggcgtttatcttctcgtgatccgaatcttcaa
aatattccagtgagaaatgaagaagggcgtcgaattcgccaagcatttattgcgcgtgaa
ggttttaaaattgttgctgccgactattcacaaattgaattacggatcatggcacattta
tcgcaagataaaggtttgttagatgcctttgctcaaggtaaagatattcaccgtgcaact
gcatctgaagtgtttggtatacctttagaagacgtcacctctgagcaacgtcgtagtgcg
aaagcgatcaactttggtcttatttatggcatgagcgcatttggcttatcgcaacagatt
ggtgttgagagaagagaagctcagcgttatatggatctctattttgaacgttatccaggt
gtcttggactatatggagcgcacacgtaaacaagcttctgaacaaggctatgttgaaacg
ttagatggtcgtcgcctctatttaccagaaattaattcaaagaatgcaattcgtcgtaaa
gcttcagagcgtgaggcgattaatgcgccaatgcagggtacagctgcggatattatcaaa
aaagctatgattgctgtggataattggatttgcaatgaatgtcctgctgatgtgcatatg
attatgcaagtacacgatgagttagtgtttgaagtgcgagagtcttacctagagaacgca
aatatcatgatccataaattgatggaaagcagtatggaattagctattccgttgaaagtg
gaagtgggtattggtaataactgggatgaagcacactag
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