Pandoraea commovens: NTU39_00180
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Entry
NTU39_00180 CDS
T08365
Name
(GenBank) relaxase domain-containing protein
Organism
pcom
Pandoraea commovens
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Paralog
Gene cluster
GFIT
Motif
Pfam:
TrwC
AAA_30
AAA_19
TraI_hel_assoc_N
PSCyt2
Motif
Other DBs
NCBI-ProteinID:
UVA77186
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All DBs
Position
unnamed:complement(32043..35621)
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AA seq
1192 aa
AA seq
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MISMTHISGGGVANSARYFDKSFSQDGGQRADNYYVNEVATAQWQGRGAEILGIQGEAVE
RREFIEFLSGQLVNPDTGEIQNLADNSKGANRRAGMDYTVSPPKSVSIAGLVGNDQRVVD
AHLQANATAMRWLEKHAAVIRVKDDNGKNKSVRANNLLYATVLHETNRENEPQIHSHNVI
VSAVYDENAKKWRSLTNDDMLNLRAQADKVYKAELAHGLKKAGYQLEYNENGVDFEIAGF
TQEQIHLYSTRKAQMDAALIARNINPAEASFEARQAAALDSRSAKNELPRDVLHSVWLET
AQSAGLDVERIVDASRVISGGKQPGREASQGIDGAAGREIDTSGTRPTGGGSLGHDTQSV
DVGYRVPGRPEGIDHAGGAYPESRGGKGGRRAPAVLSSEANQAQQAALEAVSWAIEHLTE
REQTFRLVDLELAALQFSRGSFGDVEWAVKQHVKNHLILERETESAELTYTTHRAIESEM
RLAERIRGGVGQNHVVLHRQDDFDAALAAFESRKSQETGQTFRLSQEQVESARNVLMHPD
TFQGIQGDAGAGKTAALEMVRESATNTGWNVIGIATSAAAAKELGSASGIESDTVAGFFA
KRDAQIMATQLRLNELRIAISENRPIRDTENSSVESRRLNVSTPDVDYGAGRYTFDHQRG
EVFKSPDNLRNAVGTILTELANRHRPSVEQARSQAHTLGEHIRSGVLSIGTRAADSVGRR
LTQVQQVGTVEAVAARVSLYLSKAGESDEMTHEFARKQAELSNLKRFGNVEGKKTLIVMD
ESSLTGAYDTEKISELAANIGARVVFQGDIKQHGSVAAGRAFKQAQDSGMNVSVLEETRR
FDRATPQTKRALQEMKAGNYAAAIEQLDTLEVPQGSLASTVAERYVENVQQLEARGLTAP
KVGVVAITNNDRKQINTAIHDLLATKGVLRGPSVEKSHLDDPKLTKAEQTQAVKLREKKV
DALIFRKTYREIGVQSGDVVSVIGYDVDANRIKARTEEGNIIQINPQRHDFFSPAKWETR
SYAVGDQVETRGIIRLPEQDTKRIANGTRGEITEIDENGAKVRWTRDGTESRLSNKDIRL
IDLAYAHTSYKEQGATNDREIIAVSTIGARVFNKEAAYVAATRAKDNTEIVTSDLKKLME
NAGRNVDKTTAVDMKEVVQREAVKVAQHSIEPVKGHDKAAEKGRDKGRLLEI
NT seq
3579 nt
NT seq
+upstream
nt +downstream
nt
atgatctcgatgacgcacatttctgggggcggggtggcgaactcggcccgctattttgat
aagtcgttctctcaggacggtggtcagcgcgctgacaactattacgtcaatgaggtcgcg
acggcccaatggcagggcagaggggctgagatcctaggaatccaaggcgaagcggtggag
cgccgggagtttattgaattcctgagcgggcaactcgtgaaccctgacacaggtgaaatt
cagaacctcgccgacaacagtaagggcgctaaccgtcgtgccgggatggattacacggtt
tcaccaccgaaaagcgtctcaatagccggtttggtaggtaacgatcagcgagtggtagat
gctcacttgcaggccaatgctactgcgatgcgctggctggaaaagcatgcagctgtcatc
cgggttaaagacgataacggcaaaaacaagtcggtccgcgcgaacaatctgctatacgca
accgttttgcacgagacgaatcgggagaacgaacctcagattcacagtcataacgtcatc
gtgtccgccgtatatgacgagaatgcaaagaagtggcgaagtctaacgaacgacgacatg
ctcaatctgcgagcacaggctgacaaggtctacaaagctgaacttgcgcatgggctcaag
aaggctggctaccaactcgagtacaacgagaatggggtcgactttgagattgctgggttc
acacaggaacagatacacctctattccacacggaaagcgcaaatggatgccgctttgatt
gcgcggaacatcaatccagccgaagccagcttcgaggctcggcaagcagctgcgctcgac
agtaggtcagccaagaacgaattgcctcgtgacgtgctgcactccgtatggctggaaaca
gcgcagagtgctgggcttgacgtcgagaggatagtggatgcgtcccgtgtaatttcgggg
ggaaagcaaccgggtcgggaagccagccagggtatcgacggtgcggcaggcagggaaatc
gacacaagcggaacgcgcccaacaggaggtggctcgcttggtcacgatacccagtctgtc
gacgttggatacagagttccaggccgccccgagggcattgaccatgcaggtggtgcctat
ccggaatcgagaggcgggaagggggggcggagagcccctgcggtgctgtccagcgaagca
aatcaagctcagcaggcagcacttgaagcggtgtcttgggcgatcgagcatttgactgag
cgagagcagacattcaggctggttgatcttgaattggccgccttgcagtttagtcgtggg
agctttggcgacgtcgagtgggcagtgaagcaacacgtgaagaatcatctgattctggag
cgcgaaacggagtctgcagaactgacctacacgacacatcgtgcgatcgagtccgaaatg
cgacttgccgagagaatccgaggtggcgttggacaaaaccacgtagtgctgcatcgccaa
gacgacttcgacgccgctctcgctgcattcgaaagtcgcaagtcgcaggagacggggcag
acattccggctctcccaggagcaggtcgagtcggcccgcaatgtactgatgcaccccgac
acattccagggaattcaaggcgacgccggcgccggaaagactgccgcgttggagatggtt
cgcgaatcggcgaccaatacggggtggaacgtcatcggcattgcaacgtctgcggccgcc
gcaaaggagctggggagcgccagcgggatcgagagcgacacagtagctggcttttttgcg
aagcgtgatgctcagatcatggcgacccagcttcggctaaacgaattgcgtatagcgatc
agcgaaaacaggccaatccgggatacggagaattcgagtgttgagtctcgacgcttgaac
gtttccaccccagatgtcgattatggcgcggggcgctacacattcgaccaccagcggggg
gaagtcttcaaatcgcccgacaacctacgcaatgccgtcggaacaatcttgaccgaactt
gcgaacaggcaccgaccgtctgtagagcaagctcggtcacaggcccatacgctcggagag
catattcgctctggcgtcttgtcgatcggaactcgagcagctgactctgtgggccggagg
ctcactcaagtccagcaggtaggcaccgtggaggcggttgcggcacgcgtatcgctctat
ctgtctaaggccggagagagtgacgagatgacgcatgagttcgccagaaagcaggccgag
ctgtcaaatctgaagcgcttcgggaacgtagagggcaaaaagaccttgatcgtaatggat
gagtcgtcgctcactggtgcgtatgacaccgaaaagatatcggaactcgccgcgaacatt
ggcgcccgtgttgtgttccaaggcgacatcaagcaacacggaagcgtcgcggcaggccgc
gcgttcaagcaggcgcaggattcagggatgaacgtctcagtcctcgaggaaacccgtcga
ttcgaccgagccacgccgcaaacgaagcgcgccttgcaggaaatgaaggcggggaattat
gccgctgctattgagcagctggataccctagaggtgccgcaagggagcctggccagcacc
gtcgcagagcgttacgtggagaacgtgcagcaacttgaggcgcgtggcctgactgcgccg
aaagtgggtgttgtcgcgatcacaaacaacgatcgcaagcagatcaatactgcgattcac
gacctactcgcgacgaagggggtacttcgtggcccgtccgtcgagaagtcgcatcttgac
gacccgaagctgactaaggcggagcagacgcaagcggtcaagctccgggagaagaaggtt
gatgcgctgatttttcggaagacgtaccgagagattggagtgcagagcggcgacgtcgtt
tccgtgattggatacgacgtcgacgcgaaccgtataaaagccaggacggaggagggcaac
atcattcagatcaatccgcagcgacacgatttcttctcgccggcgaagtgggagacgcgg
agctatgcggtaggtgatcaagtcgagacgcgcggcatcatccgccttccggagcaagat
accaagcgaattgccaacggcacacggggggagataactgaaattgacgagaacggcgcg
aaagtgcgctggactcgggacggtacagagtcacgtctatccaacaaggacatccgtctc
attgacctggcatatgcccacacatcgtataaggagcagggcgcgaccaatgatcgggag
atcattgcggttagcaccataggtgcaagagtcttcaataaggaggctgcttacgttgct
gccacacgcgcgaaagacaatacggagatagtaacttcagatctgaaaaagctcatggaa
aatgccgggcgcaatgtcgacaagacgaccgccgtggacatgaaggaggtcgtccagcgt
gaggccgtcaaggtcgcgcagcattcgattgagccggtaaaaggccacgataaggctgca
gagaagggcagagacaaggggcgcttgctcgaaatttag
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