Pandoraea commovens: NTU39_02075
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Entry
NTU39_02075 CDS
T08365
Name
(GenBank) ATP-dependent helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
pcom
Pandoraea commovens
Pathway
pcom03420
Nucleotide excision repair
pcom03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
pcom00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
NTU39_02075
03430 Mismatch repair
NTU39_02075
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pcom03400
]
NTU39_02075
Enzymes [BR:
pcom01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
NTU39_02075
DNA repair and recombination proteins [BR:
pcom03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
NTU39_02075
MMR (mismatch excision repair)
Other MMR factors
NTU39_02075
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
AAA_30
Viral_helicase1
AAA_12
Motif
Other DBs
NCBI-ProteinID:
UVA79848
LinkDB
All DBs
Position
377009..379093
Genome browser
AA seq
694 aa
AA seq
DB search
MSEQPSAAARDPWAELNDRQREAVDFGVGDDGAPGGPLLVIAGAGSGKTSTLAHRVANLI
VRGADPNRILLLTFSRRAAGEMERRVGAVLQKVLGLASTQPPSLPWAGTFHAIGARLLRD
FAPRIGLSEAFTIHDRSDAEDLLGLVRHDLGFSATQSRFPLKGTCLSIYSRVVNSQAPLA
EVLAKHFPWCAQWEAQLKQLFGGYVDAKQAQHVLDYDDLLLYWAETMGAPELARELDARF
DHVLVDEYQDTNRLQAQILLSMKPDGRGLTVVGDDAQSIYAFRAATIRNILDFPGQFAEP
AHVVTLERNYRSTQPILDASNAVIAESNERYAKALWTDRPSDRLPQLVNVSDESGQARWV
ADQVLAQRETGTRLTQQAVLFRTGSHSAALELELTRRNIPFVKFGGLKFLEAAHVKDMLS
ILRWAHNPASRLSGFRVAQLIPGIGPVSATRLLDAMAQSATPAQVLAEFKPPSGAATQWR
AFVEVFMTLHDTRLAWPADVDLALRWYAPLLTQRFDDAAVRQADLEQLARIANTYGSREQ
FLTELTLDPPDATSAQSGPPLLDEDYLILSTIHSAKGQEWHSVYVLNVVDGCIPSDMSTG
DDEDIEEERRLLYVAMTRAKESLQLVVPQRFYVHQQTGLGDRHVYGTRSRFVSDKMLPLY
DIFPKPREDDVPRGPVGDVTVHIDVARKLRNAWS
NT seq
2085 nt
NT seq
+upstream
nt +downstream
nt
atgtcagaacagccgtccgccgccgcccgcgatccttgggccgaactcaacgaccgtcag
cgtgaggccgtcgacttcggtgtgggcgacgatggcgcgcccggcggcccgttgctcgtg
attgccggggcggggtccggcaagacgagtacgcttgcgcaccgggtcgcgaatctgatc
gtgcgtggcgcagatcccaatcgcatcctgctgctcaccttctcgcgtcgtgccgctggc
gaaatggagcgtcgcgtgggggccgtgttgcagaaggtgctggggctggcgtcgacacag
ccgccatcgctgccgtgggcgggtacgtttcacgccatcggcgcacggctgctgcgcgat
ttcgcgccacgtatcgggctgtcggaagcgttcaccatccatgaccgcagcgacgccgag
gatttgctcgggctggtgcggcacgatctgggtttttccgcgacgcagtcacgtttcccg
ctcaagggcacgtgtctgtcgatctactcgcgcgtggtgaacagtcaggcgccgctggcc
gaagtgcttgcgaagcatttcccgtggtgtgcgcaatgggaagcgcagctcaagcagctt
ttcggcggttatgtcgacgcgaagcaagcgcagcacgtgctcgattacgacgacctgctg
ctgtactgggcggagacgatgggcgcaccggaactggcgcgcgagctcgatgcccgcttc
gatcatgtactcgtcgacgagtatcaggacaccaatcgcttacaggcgcagattcttctc
tcgatgaaaccggacgggcgtggcctgacggtcgtgggcgacgatgcgcaatcgatctac
gcatttcgcgcggcgacgatccgtaacatcctcgatttcccgggccagttcgccgagccg
gcgcacgtggtgacgctggagcggaactaccggtcgacgcagccgattctcgatgcgtcc
aatgctgtgatcgccgagtcgaacgagcgctacgcgaaggcgttgtggacggaccgacca
tcggaccggttgccgcaactcgtcaatgtgagcgacgaatcggggcaggcgcgctgggtc
gccgatcaggtgctggcacaacgtgagaccggtacgcgactcacgcaacaggcggtgctg
tttcgcacgggcagtcacagtgcggcgctggaactggagctcacccgtcgcaatattccc
ttcgtgaagttcggtgggttgaagtttctcgaagcggcgcacgtgaaggacatgctgtcg
atcttgcgatgggcgcataacccggcgagccggttgtcgggttttcgcgttgcgcagttg
atccccggcatcgggcctgtaagcgccacgcgcttgctcgatgccatggcgcagtccgcg
acacccgcgcaggtactggccgagttcaagccaccgtcgggtgccgcgacgcagtggcga
gcgttcgtcgaagtcttcatgacgttgcacgacacacggctggcgtggccggcagatgtg
gacctggcgctgcgctggtacgcaccgctgctcacccaacgtttcgacgacgccgccgtg
cgtcaggccgatctcgaacaactcgcgcgcatcgccaacacctacggctcgcgcgagcaa
ttcctcaccgagctgacgctcgatccccccgatgccacgagcgcgcaatccggtccgccg
ctcctcgatgaggactacctgatcctgtcgacgattcacagtgccaaggggcaggagtgg
cattcggtgtacgtgctcaacgtggtcgatggctgtattccctccgacatgagcaccggt
gacgacgaagacatcgaggaagagcgacgtttgctctatgtggcgatgacgcgtgcaaaa
gagtcgctgcaactcgttgtgccgcagcgcttctacgtccatcagcaaaccggtctgggc
gatcgccatgtgtatggcacgcgcagccgtttcgtgtccgacaagatgctgccgctgtac
gacattttccccaagccgcgcgaggacgatgtgccgcgcggaccggtcggcgacgtcacg
gtgcacatcgacgtcgcgaggaaacttcgcaatgcctggtcctga
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