KEGG   Pandoraea commovens: NTU39_02200
Entry
NTU39_02200       CDS       T08365                                 
Symbol
alkB
Name
(GenBank) DNA oxidative demethylase AlkB
  KO
K03919  DNA oxidative demethylase [EC:1.14.11.33]
Organism
pcom  Pandoraea commovens
Brite
KEGG Orthology (KO) [BR:pcom00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:pcom03400]
    NTU39_02200 (alkB)
Enzymes [BR:pcom01000]
 1. Oxidoreductases
  1.14  Acting on paired donors, with incorporation or reduction of molecular oxygen
   1.14.11  With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
    1.14.11.33  DNA oxidative demethylase
     NTU39_02200 (alkB)
DNA repair and recombination proteins [BR:pcom03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   Direct repair
    NTU39_02200 (alkB)
SSDB
Motif
Pfam: 2OG-FeII_Oxy_2
Other DBs
NCBI-ProteinID: UVA79870
LinkDB
Position
complement(401913..402572)
AA seq 219 aa
MTFDLFGNDADDDTTNAPQTDELGPGAFVLRGFARARLATLQTDIDAVIAQAPLRHWLTP
GGKRMSVAMTNCGDVGWISDKMGYRYGTHDPLSKQPWPAMPASFVALASDASEAAGYRDF
SPDACLINRYTLDARLTLHQDRDERELGAPIVSVSLGLPAVFLWGGLQRGDRTRRVRLEP
GDVVVWGGPSRLVYHGIASVEGSFDAQAVRYNLTFRQAR
NT seq 660 nt   +upstreamnt  +downstreamnt
atgacgttcgacctcttcggcaacgatgccgacgacgacaccaccaacgccccgcaaacc
gacgaactcggcccgggcgcgtttgtgctgcgcggcttcgcacgcgcgcgtctcgcgacg
cttcaaacggatatcgatgcggtgattgcgcaggccccgttgcgtcactggctgacgccg
ggcggcaagcggatgtcggtcgccatgaccaattgcggcgacgtagggtggatcagcgac
aagatgggttatcggtacggcacgcacgacccgctctcgaaacagccgtggcctgcgatg
cctgcttcgttcgtggcgctggcaagcgacgcttccgaggccgccggatatcgcgacttc
tcgcccgacgcgtgcctcatcaaccgctatacgctcgacgcgcgactgacgttgcatcag
gatcgcgacgaacgcgagttgggcgcgcctatcgtgtccgtctcgctgggcttgcccgct
gtctttctgtggggcggcctgcaacgaggagaccgcacgcggcgcgtgcggctggagccg
ggcgacgtcgtcgtctggggtggcccctcgcgactcgtctatcacggcattgcaagcgtc
gaaggcagcttcgacgcgcaagccgtgcgttacaacctcactttccggcaggcgcgctga

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