Pandoraea commovens: NTU39_02720
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Entry
NTU39_02720 CDS
T08365
Name
(GenBank) transcriptional regulator GcvA
KO
K03566
LysR family transcriptional regulator, glycine cleavage system transcriptional activator
Organism
pcom
Pandoraea commovens
Brite
KEGG Orthology (KO) [BR:
pcom00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pcom03000
]
NTU39_02720
Transcription factors [BR:
pcom03000
]
Prokaryotic type
Helix-turn-helix
LysR family
NTU39_02720
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Gene cluster
GFIT
Motif
Pfam:
LysR_substrate
HTH_1
HTH_34
Motif
Other DBs
NCBI-ProteinID:
UVA79965
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Position
complement(512351..513391)
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AA seq
346 aa
AA seq
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MDLRRLPNLSALRAFEAAARLESFSRAAEELFVTHGAISHQIRALEQELGTILFARNGKR
ISITPAGRQYAASIRAALTDIAQATRKLQAGTRSERRLVLTTMPSFASRWLTPRIGRFID
RHPELEVELRCSAQLTDFERDDVDIALRMGKGNWPGLHIEKVLDDVFFPACSPSYNDGKL
PQTADEFRQSTLLRSQDEPWAPWFASAGFDIPEPMQGMMYEDSGMLSQAAIVGQGVALVR
RSLAVGDIMAGRLVRLSDVDTPCEWDYFFVCPLAVLETKRVQAFRTWFLEEVAAFELVKD
TRQRPTKPSRAALAAGMAATAGEMATDAQLGLDPAKLPDDGAPTHA
NT seq
1041 nt
NT seq
+upstream
nt +downstream
nt
atggaccttcggagacttcccaaccttagcgccttgcgcgccttcgaggcggctgcccgc
ctggagagcttttcccgtgcggcggaagagttgttcgtcacacacggcgcaatcagccat
cagattcgcgcgttggagcaggagctgggcaccatcctgttcgcccgcaacggcaagcgc
atcagcatcacgcctgcggggcgtcagtacgctgcgtcgatccgggccgccctcaccgac
attgcgcaggccacgcgcaagctgcaagcgggcacgcgcagcgagcggcgcctggtgctc
accaccatgccgtcgttcgccagtcgctggctgaccccgcgcatcggccgcttcatcgac
cggcatccggaactggaagtggagttgcgatgcagcgcgcagttgaccgatttcgagcgc
gacgacgtcgacatcgcccttcgtatgggcaagggtaactggccggggctgcacatcgag
aaggtgctcgacgacgtcttcttccccgcgtgcagtccatcctataacgacggcaagctg
ccgcagaccgccgacgaatttcgccaaagcacgctgctgcgctcgcaagatgagccgtgg
gccccgtggttcgcgtccgcaggtttcgatatccccgagccgatgcaagggatgatgtac
gaggattccggcatgctctcgcaggccgccatcgtcggtcagggggtggcgctggtgcgt
cgctcgctcgcggtcggcgacatcatggcgggacgcctcgtgcggctgtccgacgtcgat
acgccgtgcgaatgggattacttcttcgtgtgtccgctggccgtgctggagacgaaacgc
gtgcaggcgttcaggacgtggtttctggaggaagtggcggcgttcgagctggtgaaggac
acgcggcagcgtccgacgaagccgagccgtgctgcgctggcggccgggatggccgcgacg
gccggggagatggcgaccgatgcgcaactgggtctcgaccctgcgaagctgcccgacgac
ggggcaccgacgcacgcctga
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