Pandoraea commovens: NTU39_03050
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Entry
NTU39_03050 CDS
T08365
Name
(GenBank) LuxR family transcriptional regulator
KO
K18304
LuxR family transcriptional regulator, quorum-sensing system regulator LasR
Organism
pcom
Pandoraea commovens
Pathway
pcom02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
pcom00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
NTU39_03050
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pcom03000
]
NTU39_03050
09183 Protein families: signaling and cellular processes
01504 Antimicrobial resistance genes [BR:
pcom01504
]
NTU39_03050
Transcription factors [BR:
pcom03000
]
Prokaryotic type
Helix-turn-helix
LuxR family
NTU39_03050
Antimicrobial resistance genes [BR:
pcom01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexPQ-OpmE [MD:
M00769
]
NTU39_03050
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Autoind_bind
GerE
Sigma70_r4_2
Sigma70_r4
Motif
Other DBs
NCBI-ProteinID:
UVA80026
UniProt:
A0ABY5QGT7
LinkDB
All DBs
Position
complement(580405..581319)
Genome browser
AA seq
304 aa
AA seq
DB search
MRATRPLSPRSFADGLSALQDATGFDVLHTLLPSLCSALGQRYFSYRGHFALPDGRFATP
RLGNLPRVWQQRYDAQRYDTVDPVLSLAARQLTPVEWTVGLYASPEARQLLHEQRAAGLR
FGITYPVFTPSGASGTLSLSSPRRTAHFARPSAQHHAQPQGRHDARYCARPTHDVSDSGA
HVWASHAGVVLAAHVHEAVWRIVQRDAARRCAPALTPRERECLRWVACGKTSWEIGRILT
LSEHGVVFHLRSAMRKFDVSSRHRAAKMASDYGLLDDVALPPHPKVKEITFATQDRQASC
SVST
NT seq
915 nt
NT seq
+upstream
nt +downstream
nt
atgcgagccacgcgccctctctctccccgctcgtttgccgacggcctgagcgccctgcag
gacgccaccggcttcgacgtccttcacacgctgctcccttcgctttgcagcgcgctcggc
caacgctacttcagctatcgcggccacttcgcattgcccgacggccgtttcgcaacaccg
cgcctcggcaatcttccccgtgtgtggcagcaacgctatgacgcacaacgctatgacacc
gtcgaccctgtcctctcgctcgctgcccggcaactgacaccggtggaatggacggtcggg
ttgtacgcgtcccccgaggcgcgacagctgctccacgaacagcgcgctgccgggttgcgc
ttcggcatcacgtatccggtcttcacgccatcgggggcatcgggcacattgagtctgtcg
tcaccgagacgcaccgcgcatttcgcccgcccatcggcacaacatcacgcacaacctcag
ggtcgccacgatgcgcgctactgcgcgcggccaacgcatgacgtcagcgattcgggcgca
catgtgtgggcgtcgcatgccggcgtcgtactcgcagcccacgtgcatgaagccgtgtgg
cgcatcgttcagcgcgatgcggctcgtcgctgcgcgccagcactgacgccgcgcgagcgc
gagtgcttgagatgggtggcgtgcggcaagacatcgtgggaaatcggtcgcatcctcacg
ctttccgaacatggcgtggtcttccatctgcgcagtgccatgcgcaagttcgacgtatcg
agccgccatcgcgccgcgaagatggcaagcgactacggactgctcgacgatgttgcgttg
ccgccgcacccgaaggtcaaggagatcactttcgcgacgcaagatcggcaagcgtcttgt
agcgtgtcaacgtga
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