KEGG   Pandoraea commovens: NTU39_03260
Entry
NTU39_03260       CDS       T08365                                 
Symbol
rapZ
Name
(GenBank) RNase adapter RapZ
  KO
K06958  RNase adapter protein RapZ
Organism
pcom  Pandoraea commovens
Brite
KEGG Orthology (KO) [BR:pcom00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:pcom03019]
    NTU39_03260 (rapZ)
Messenger RNA biogenesis [BR:pcom03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   Other RNA degradation factors
    Others
     NTU39_03260 (rapZ)
SSDB
Motif
Pfam: PapZ_C RapZ-like_N AAA_18 AAA_16 CoaE AAA_22 AAA_28 TadZ_N SLFN-g3_helicase
Other DBs
NCBI-ProteinID: UVA80060
LinkDB
Position
complement(619246..620118)
AA seq 290 aa
MKIVLITGVSGSGKSLALNVLEDAGYYCVDNLPSRFLPELAVYLGTQHYTRLAVAIDARS
GGSLADLPPIIGGLRRFGHDVRVLFLNATTQTLVQRFSETRRRHPLSATGDDTLSATGSL
VEAIEKEREMLSSVTELGHQIDTSNLRASALRRWIREFVQHDQTGLTLMFESFGFKHGVP
LDADLVFDVRSLPNPYYDVQLRPLTGRDQPVIDFLSAIPEVDEMINDIGAYLQKWLPSYM
RDNRSYLTVAIGCTGGQHRSVFISETLGARFRDEASVLVRHRELAPIDTK
NT seq 873 nt   +upstreamnt  +downstreamnt
atgaagatcgtactgattaccggcgtctccggttcgggcaaatcgctcgccctgaacgtc
ctcgaggatgcgggttactactgcgtcgacaatctgccgtcgcgctttttgcctgaactc
gccgtctacctcggaacacaacactacacgcgcctcgcggtcgccatcgacgcgcgcagc
ggcggctcgctcgccgatctgccgccgatcattggcggcctgcgccgtttcggccatgac
gttcgtgtgctgttcctcaatgcgaccacgcaaacgctggtgcagcgcttctcggagacg
cgccgccgtcacccgctttccgcaactggcgacgacacgctctcggccaccggctcgctt
gtcgaagccatcgagaaagagcgtgagatgctcagcagcgtcaccgagctgggtcatcag
atcgacaccagcaatctgcgcgcgagtgcactgcgccgctggattcgcgaattcgtgcaa
cacgatcagaccggcctcacgctgatgttcgaatcgttcggattcaaacatggcgtgccg
ctcgacgccgaccttgtcttcgatgtccgctcgctgcccaatccgtattacgacgtgcaa
ttgcgcccgctgaccgggcgcgatcaacccgtgatcgatttcctgtccgccattcccgaa
gtggacgagatgatcaacgacatcggcgcctatctgcaaaagtggttgccgagctatatg
cgcgacaaccgcagctatctgacggtcgccatcggatgtacgggcgggcagcatcgctcc
gtgtttatctccgagacgctcggcgcgcgctttcgcgacgaagcgagcgtgctcgtgcgt
caccgcgaactcgcccccatcgatacgaagtga

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