Pandoraea commovens: NTU39_04355
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Entry
NTU39_04355 CDS
T08365
Name
(GenBank) PLP-dependent aminotransferase family protein
KO
K00375
GntR family transcriptional regulator / MocR family aminotransferase
Organism
pcom
Pandoraea commovens
Brite
KEGG Orthology (KO) [BR:
pcom00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pcom03000
]
NTU39_04355
Transcription factors [BR:
pcom03000
]
Prokaryotic type
Helix-turn-helix
GntR family
NTU39_04355
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Aminotran_1_2
GntR
HTH_Crp_2
HTH_36
RepL
Fe_dep_repress
HTH_IclR
Motif
Other DBs
NCBI-ProteinID:
UVA80263
UniProt:
A0ABY5QJD6
LinkDB
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Position
880943..882553
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AA seq
536 aa
AA seq
DB search
MSSRISAAMWNQLFLVSARAGMSLQSQIRQMLVSAILDERLMRGAAVPSSRELAEGLGVA
RNTVVLAYQQLVDEGYLIARERRGYFVNGDILAPRVGSQPASARDARDGRDGRDGRDGKH
AQEGRAQTESAGTIAPLDPSTPDWEGRYVVRPSAQRNIVKPIDWQQYQYPFIYGQFDPTM
FPTADWRECCQKALTVMEIRDWAPDMIARDDETLIQQIRTRVLPRRGVWADADQIVLTNG
AQQALYLLADLLVGARTTVGVEDPGYPDARNIFAMRTPKLVGLPVDEHGLPVDERLSQCD
YVYVTPSHQCPTTTTMPLAHREALLRRAEADDFVVIEDDYESENSYSDIPIPALKSLDRS
DRVIYIGSLSKSFAPGLRLGYIVAPAALVNELRALRRLMIRHPSAFIQRSFSMFLALGHH
DALLRRLADTYAKRAEVLSAALSTHMPEATFVRVKGGASCWVQGPPQLNANLLAARAKSR
GILIEPGDVFFMGDNPPRNMFRLGFSSIRLEHIEAGVIALAEVMRETMAEATPAQR
NT seq
1611 nt
NT seq
+upstream
nt +downstream
nt
atgtcgagccggatttccgcggcgatgtggaaccagttgtttttggtgtcggcgcgagcg
ggcatgagtttgcagagccagattcgccagatgctcgtgtcggcgattctggacgaacgc
ctgatgcgcggtgcggccgtgccgtcgtcacgcgagctggccgaagggctgggcgtggcg
cgcaacacggtggtgctggcctaccagcaactggtcgacgagggctatctgatcgcgcgg
gagcggcgcggttacttcgtcaatggcgatatcctcgcgccgcgcgtggggtcgcagccc
gcgagtgcgcgggacgcacgcgatggccgagacggcagggacggtcgtgatgggaagcac
gcgcaggaagggcgggcgcagacggaatccgctggcaccatcgccccgctggatccgtcc
acgcccgactgggagggacgttacgtcgtgcggccttcggcgcagcgcaacatcgtgaag
cccatcgactggcagcagtaccagtacccgttcatttacgggcagttcgatccgaccatg
ttcccgaccgccgactggcgcgagtgctgccagaaggcgctcaccgtcatggagattcgc
gactgggcgccggacatgatcgcgcgcgacgacgaaacgctcatccagcagattcgcacg
cgcgtgttgccgcgtcgcggcgtgtgggccgatgccgatcagatcgtgctcaccaatggt
gcgcaacaggcgctgtatctgctcgccgatttgctggtgggcgcgcgtacgaccgtaggc
gtcgaggaccccggttatcccgatgccagaaacatcttcgcgatgcgcacgccgaagctg
gttggactgccggtcgacgagcacgggttgccggtggacgagcgcttgtcgcagtgcgat
tacgtgtacgtgacgccgtcgcaccaatgtcctacgaccacgacgatgccgctcgcgcat
cgcgaggcgttgctgcgtcgcgcagaggccgacgacttcgtggtgatcgaagacgattac
gagagcgagaacagctattcggacattccgattccggcgctcaaaagtctggaccgcagc
gaccgggtgatctacatcggcagtctgtcgaagtcgttcgcgcccggattgcggctgggg
tatatcgtcgcaccggcggcgctggtcaatgagctacgtgcgttgcgccgtttgatgatt
cgtcacccgtcggcgttcattcagcgttcgttctcgatgttcctggcacttggccatcac
gacgcgctgttgcgacgtctggccgatacctatgccaagcgtgccgaagtgctgagcgct
gcgctctcgacgcacatgccggaagcgacgttcgtgcgcgtgaagggcggtgcgtcgtgt
tgggtgcaggggccaccgcagttaaacgcgaacttgctggcggcgcgggccaagtcgcgc
ggcattctgatcgagccgggcgatgtatttttcatgggggataacccgccgcgcaacatg
ttccggctcgggttctcgtcgatccggctggagcatatcgaggcgggtgtcattgcttta
gcggaggtcatgcgcgagacgatggccgaggcgacaccggcgcagcgctga
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