KEGG   Pandoraea commovens: NTU39_05030
Entry
NTU39_05030       CDS       T08365                                 
Symbol
sctD
Name
(GenBank) type III secretion system inner membrane ring subunit SctD
  KO
K03220  type III secretion protein D
Organism
pcom  Pandoraea commovens
Brite
KEGG Orthology (KO) [BR:pcom00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:pcom02044]
    NTU39_05030 (sctD)
Secretion system [BR:pcom02044]
 Type III secretion system
  Type III secretion core apparatus
   NTU39_05030 (sctD)
SSDB
Motif
Pfam: Yop-YscD_cpl CHAD DUF6587 Y4YQ_C Yop-YscD_ppl_2nd
Other DBs
NCBI-ProteinID: UVA80390
UniProt: A0A5E4ZBC8
LinkDB
Position
complement(1018927..1020255)
AA seq 442 aa
MPTLTLLDGPLAGRPMPLPAGPLTIGSGEADIAMTLDNEANVTLHVEEDRVRLVSHTPVW
VDGMPVMATDDASDTRPLPLHTVIDLAGLGVWLSDDTEPLPTPLPKRPARRLPPSTTADA
ADVPDVAPSIDANRQRRSPAAWLAISGLSLLIAGAGVAMWRTGTANVISRPPQPDALRAL
ATRIAPNISLNTAGDAVRLSGGCIDDDTRARLRAEARWLGKALSDDTWCPANAVQTVSTL
LRLHGFGNAHVNVAADGALVVGGPLVADARWRAASDALDTLALPHGWRVANGTAHGFDQL
VKTLRESGQLRGVDISRDRNGWRITGALSVGRQASLKGLANTWNRSADAMPLRIDPLPPP
IPTLAETGFSAPLVSIGGSPGAPQLTLADGTRLAQGVRLPGGTRIVAIHADGVSIGAYDR
LFYLPLTPATPETHHDDPSDPP
NT seq 1329 nt   +upstreamnt  +downstreamnt
atgccaacgctaacgctcctcgacgggccgctcgccgggcgtcccatgccacttccggcc
ggaccgctcaccatcggaagtggcgaggccgacattgcgatgacgctcgacaacgaagcg
aacgtcaccctgcatgtcgaggaagatcgcgtcaggttggtctcgcacactcccgtctgg
gtcgacggcatgccggtcatggcgactgacgacgcgtccgacacccgcccacttcccctg
cacaccgtgatcgatcttgcgggcctcggcgtgtggctcagcgacgacaccgagccgttg
cccacgccgctccccaagcgccccgcacgtcgtctccctccgtccacgacggcggatgcc
gcagacgttccagacgttgcaccgtcaatcgacgcgaacagacagcgccgctcgcctgcc
gcctggctggcaatctcggggctgtcgctgcttattgctggcgcgggtgtcgctatgtgg
cgcaccggaaccgccaacgtcatctcccgtcccccgcaacccgatgccctccgggcgctg
gccacccgcatcgcgcccaatatctcgctcaatactgcaggtgacgccgtgcgcctgtcc
ggcggttgtatcgacgacgacacacgcgcccgcttacgcgccgaggcgcgttggctcggc
aaagcgttgagcgacgacacctggtgccccgcgaatgccgtacagacggtgagcacgctg
ctgcggttgcatggcttcggcaatgcacatgtcaacgtggccgcggacggtgcgctggtc
gtcggtggcccgctcgttgccgatgcccggtggcgcgctgcgtcggatgcgctcgacacg
ctcgcgttgcctcatggatggcgcgtggcgaacggcaccgcccatggtttcgaccagttg
gtgaaaacactgcgcgagtcaggtcaactgcgcggtgtcgacatctcgcgcgaccgcaac
gggtggcggatcaccggtgcattgtctgtcggacggcaagcgtcgctcaagggcctcgcc
aacacgtggaatcgttcggccgacgccatgccgctacgcatcgatccgctgccgccaccc
attccaacgctggccgagacgggcttctccgcaccgctcgtcagcattggcggttcgcca
ggtgcaccgcagcttacgcttgccgacggcacccgtcttgcgcagggcgtccgcctgcct
ggcggcacgcgcatcgttgccattcatgccgacggcgtgtcgatcggtgcctacgaccgc
ctcttttaccttcccctgacacccgctactccggagacccaccatgacgatccgtctgac
ccgccttga

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