Pandoraea commovens: NTU39_05375
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Entry
NTU39_05375 CDS
T08365
Symbol
dnaB
Name
(GenBank) replicative DNA helicase
KO
K02314
replicative DNA helicase [EC:
5.6.2.3
]
Organism
pcom
Pandoraea commovens
Pathway
pcom03030
DNA replication
Brite
KEGG Orthology (KO) [BR:
pcom00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
NTU39_05375 (dnaB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pcom03032
]
NTU39_05375 (dnaB)
Enzymes [BR:
pcom01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
NTU39_05375 (dnaB)
DNA replication proteins [BR:
pcom03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
NTU39_05375 (dnaB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DnaB_C
DnaB
AAA_25
AAA_16
Lipase_GDSL_2
IMD
nSTAND3
DUF6616
Motif
Other DBs
NCBI-ProteinID:
UVA80454
UniProt:
A0ABY5QIL1
LinkDB
All DBs
Position
1081399..1082772
Genome browser
AA seq
457 aa
AA seq
DB search
MGTRDPVAAKRPIFAQEAEQSVIGALLLDNEAYDRVCDTISANDFYISEHAAIYRAIEAL
LSIGKHADVITVFQRLQDTGVKIERPLAYLNELASNTPSAANIVRYAEIVRDRAMLRGLA
RSANKALEMAYKTGGREAADVIDQAQAELLSLTDNAQRANDGFQPITPYLAEVVQHVDDM
YHREDKSGIVGLATGFTALDELTSGLMDTDFVVIGARPAMGKTALSMNIAEYVATTLGRT
VAVASMEMGGFALAMRLLASASKLSQNRLRAGRMRDEDWPRLTHGAMHLNDIPIYVKQES
TVTPTSLRAAVRKLKRMVGEKQLGLIVVDYLQLMDIESPTANRAADLAQVSRALKKLAMD
ERVPVIALAQVNREVEKRANKRPVMSDIKDCGAIEQDADQIWFLYRDEVYNPDTMDKGSA
ELIVEKQRNGARATIRLAWRGDVTRFEDFSSEPQGST
NT seq
1374 nt
NT seq
+upstream
nt +downstream
nt
atgggaacgcgcgatcccgtcgccgcgaagaggccgatctttgcccaagaggctgagcaa
tccgtaatcggtgcgctgctactcgacaacgaggcatacgaccgcgtctgcgacaccatc
tctgcaaacgacttctacatctccgagcacgccgcgatctaccgcgcaatcgaggcgttg
ctatccatcggaaagcacgcagacgttatcacggtgtttcagcgactacaggacaccggc
gtcaagatcgagcggccgctcgcctatctgaatgaactggcctccaacacgcccagcgct
gcgaacatcgtgcgatacgcggagattgttcgcgatcgcgcgatgctgcgcgggctggct
cggtcggccaataaagctctggagatggcatacaaaacgggcggccgtgaagctgccgat
gtcatcgaccaggcgcaggccgaactgctgtcgctaaccgataacgctcaacgcgcaaac
gatggatttcagccgattacgccgtacttggccgaagtggtgcagcacgtcgatgacatg
tatcaccgcgaggataagtccgggatcgtgggccttgcgacgggctttacagcgctagat
gaactgacgtcgggactgatggacaccgacttcgttgtcatcggcgcacgtcccgcgatg
ggcaagacggcgctttcgatgaacattgccgaatacgttgctaccacgctgggtaggacc
gtcgcggttgcatcaatggagatgggtggcttcgcgttggcgatgcgcctgctcgcgtca
gcttcgaagctcagtcagaaccgacttcgggcaggtcgaatgcgcgacgaagactggcca
cgcctgacgcatggcgcaatgcacctcaacgacatcccgatctacgtcaagcaggagtcg
acggtcacgccgacctcgcttcgcgctgcggtgcggaagctcaagcggatggtgggtgag
aagcaactcgggctgatcgtcgtggactacctgcaactgatggatatcgagtcgcccacg
gctaaccgcgcggccgacctcgcgcaggtttcacgagcattgaaaaaacttgcgatggac
gagcgcgtaccggtgatcgcgctggcccaggtgaatcgcgaagtcgagaagcgtgccaac
aaacggccggtaatgtccgacatcaaggactgcggcgccatcgagcaggacgccgatcag
atctggttcctgtatcgcgatgaggtctacaaccccgacacgatggacaaggggagcgcc
gagttgatcgttgagaaacagcgcaacggcgcgcgggccaccatccgactggcgtggcgt
ggtgacgtaacaagattcgaggatttctcgagtgagccgcaaggctcaacgtaa
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