Pandoraea commovens: NTU39_07115
Help
Entry
NTU39_07115 CDS
T08365
Symbol
lptF
Name
(GenBank) LPS export ABC transporter permease LptF
KO
K07091
lipopolysaccharide export system permease protein
Organism
pcom
Pandoraea commovens
Pathway
pcom02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
pcom00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
NTU39_07115 (lptF)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pcom02000
]
NTU39_07115 (lptF)
Transporters [BR:
pcom02000
]
ABC transporters, prokaryotic type
ABC-2 type and other transporters
Lipopolysaccharide transporter
NTU39_07115 (lptF)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LptF_LptG
DUF4381
Motif
Other DBs
NCBI-ProteinID:
UVA80765
LinkDB
All DBs
Position
complement(1458779..1459906)
Genome browser
AA seq
375 aa
AA seq
DB search
MIFQRSLQRELNYTAGAVFMVLITVMLTTMMIRILGFAASGKADPRDVLVLIGLAVIGYL
AVILIVTLFVSILFVLTRWYRDSEMVVWFASGLSITDFIKPVLRFATPYLAVITFCALVA
WPWANQQISLLEARFAQRDDVSMISPGQFRESAASHRVFFVETVSPDATKVHNVFVSGTE
NGKVSVVVSKDGHIETAKDGNRYIVLEKGRRYDGVPGQPDYRVMEFERYGVKIDNPTTAS
ADNTPTKGVPTARLFREIQNPIFRGEIVWRVGLPLLALALVLLAVPLAYQNPRHGRTVNL
VMAVLIYLGYTNLLSLSQAWVAQERLPLAIGVWLLHALALAVIVLLYVRRVRFRGLFSRR
RNNGSGAVRASGGAR
NT seq
1128 nt
NT seq
+upstream
nt +downstream
nt
atgatttttcagcgttccctgcagcgcgagctgaactacaccgccggggccgtcttcatg
gtgctgatcaccgtcatgctaacgacgatgatgatccgcatcctgggcttcgccgcgtcc
gggaaagccgatccgcgcgacgttctcgtgctcatcggtctggccgtcatcggctacctc
gccgtcattctgatcgtgacgctcttcgtctcgatcctgttcgtcctgacccggtggtac
cgcgactccgaaatggtcgtgtggtttgcctcgggactgtccatcaccgacttcatcaag
ccggtgctgcgctttgccacgccctatctggccgtcatcaccttctgcgcgctggttgcc
tggccctgggcgaaccagcagatctctctgctcgaagcccgcttcgcccagcgcgacgac
gtctccatgatctcgccgggccagttccgcgagagcgcggcgagccatcgcgtgttcttc
gtcgagacggtttcgccggacgccaccaaagtccacaacgtcttcgtctcaggcacggaa
aacggcaaggtgagcgtcgtggtgtcgaaagacggtcacatcgagacggccaaggacggc
aaccgctatatcgtgctggaaaagggccgtcgctacgacggcgtgccgggtcagcccgat
taccgcgtgatggagttcgagcgctacggcgtgaagatcgacaatccgacgaccgcaagc
gccgacaacacgccgaccaagggcgtgcccaccgcgcggctgttccgtgaaatccagaat
ccgatcttccgcggtgaaatcgtctggcgcgtgggcttgccgctgctcgcactggcgctc
gtgctgctcgccgtgccactggcctatcagaatccgcgtcacgggcgcaccgtcaacctg
gtcatggccgtgctgatctatctgggctacaccaacctgctgagcctgtcgcaggcgtgg
gtcgcgcaggaacgtctgccgctggccatcggcgtgtggctgttgcatgctctggccttg
gcggtcatcgtgctgctttacgtgcgacgcgtgcgttttcggggtcttttcagccgacgc
cgtaacaacggttccggcgcggtgcgtgcatcgggaggggctcgctga
DBGET
integrated database retrieval system
