KEGG   Pandoraea commovens: NTU39_07660
Entry
NTU39_07660       CDS       T08365                                 
Name
(GenBank) AMP-binding protein
  KO
K01897  long-chain-fatty-acid---CoA ligase [EC:6.2.1.3]
Organism
pcom  Pandoraea commovens
Pathway
pcom00061  Fatty acid biosynthesis
pcom00071  Fatty acid degradation
pcom01100  Metabolic pathways
pcom01212  Fatty acid metabolism
pcom02024  Quorum sensing
pcom04146  Peroxisome
Module
pcom_M00086  beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:pcom00001]
 09100 Metabolism
  09103 Lipid metabolism
   00061 Fatty acid biosynthesis
    NTU39_07660
   00071 Fatty acid degradation
    NTU39_07660
 09140 Cellular Processes
  09141 Transport and catabolism
   04146 Peroxisome
    NTU39_07660
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    NTU39_07660
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01004 Lipid biosynthesis proteins [BR:pcom01004]
    NTU39_07660
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:pcom04147]
    NTU39_07660
Enzymes [BR:pcom01000]
 6. Ligases
  6.2  Forming carbon-sulfur bonds
   6.2.1  Acid-thiol ligases
    6.2.1.3  long-chain-fatty-acid---CoA ligase
     NTU39_07660
Lipid biosynthesis proteins [BR:pcom01004]
 Acyl-CoA ligase
  Long/very long chain acyl-CoA ligase
   NTU39_07660
Exosome [BR:pcom04147]
 Exosomal proteins
  Exosomal proteins of breast milk
   NTU39_07660
  Exosomal proteins of breast cancer cells
   NTU39_07660
SSDB
Motif
Pfam: AMP-binding AMP-binding_C
Other DBs
NCBI-ProteinID: UVA80864
LinkDB
Position
complement(1587394..1588902)
AA seq 502 aa
MNIASTLARAAQRHPGHVATYVGDAPQYDYATLARRCAAIAAGLRSMDLPDGARVALWMR
NRPEYLEWLYAIWWAGLVAVPINAKLHPREAAFIVNDAEAAVLLAEAEDLLAVRDHIGSQ
VTGFAPEDAQIARWLASDASGEVASRENTDLAWIFYTSGTTGRPKGVMLSHRNLWSMAAC
YMTDVDAVGRDDRTLYAAPMSHGAGLYSVVFMMQAAGHIFPASGGFDAEEMFALAETLGN
VSCFAAPTMVNRLVRHTQASGASSAGFKTLVYGGGPMYSADIERALSVMGSRFVQIYGQG
ESPMTITVLPRDEIAATAHPRWSQRLASVGHAHAMVEVAVVDDDGVPVATGEPGEVVVRG
DVVMQGYWRNPEATAKTLRDGWLWTGDIGVLDDDGFLTLKDRSKDVIISGGTNIYPREVE
EVLLRADGVAEVAVIGEVDAEWGEVVVAYVVCTPGVTLDSAMLDAYCLEHIARFKRPKRY
VAVDALPKNHYGKVLKTALRTL
NT seq 1509 nt   +upstreamnt  +downstreamnt
atgaatattgccagtacgctcgcccgcgcggcccagcgccaccccgggcatgttgccacc
tatgtcggcgacgcgccgcagtacgactacgcgacactcgcgcgacggtgtgctgccatc
gcagccgggttgcgctcaatggatctgcccgacggcgcacgcgtcgcgctctggatgcgc
aaccgtcccgagtatctcgaatggctctatgcgatctggtgggccgggctggtggccgtg
cccatcaacgcgaaactgcatccgcgcgaggccgctttcatcgtcaatgacgccgaggct
gcggtattgcttgcggaggcggaagacctgctagcggttcgagaccatatcggcagtcag
gtgacgggctttgcgccggaggacgcgcaaattgcccgttggctggcaagcgatgcgagc
ggcgaggtggcgtcccgcgagaataccgatctggcgtggatcttctatacgtcggggacg
acagggcgtccgaagggagtgatgctctcgcatcgcaacctctggtcgatggcggcctgc
tatatgacggacgtcgacgccgtggggcgcgacgaccgcacgctatatgccgcccccatg
tcgcacggcgccggactctacagcgtcgtgttcatgatgcaggcggcggggcatatcttc
cccgcgtcgggtggcttcgatgcggaggaaatgtttgcgctggccgagacgcttggcaat
gtctcctgcttcgccgcgccgacgatggtcaatcggctggtgcggcacacgcaggcctca
ggcgcttcttcggcgggattcaagaccctcgtctatggcggcgggccgatgtattcggcc
gacatcgagcgcgcgttgtcggtaatgggttcgcggttcgtgcagatctacgggcagggg
gagtcaccgatgacgatcacggtgttgccacgcgacgaaatcgcggcgacggcacaccct
cgatggtcgcaacgactggcatcggtcggccatgcccacgccatggtggaggtggcggtg
gtcgatgacgacggcgtacctgtagccaccggcgaaccgggcgaagtcgtggtccgcggc
gatgtcgtgatgcaaggctattggcgcaatccggaagcgaccgccaagacgctgcgcgac
ggctggctgtggacgggcgacatcggtgtgctggatgacgacggcttcctcactctcaag
gatcgctcgaaggacgtgatcatctccggcggcacgaatatctacccgcgcgaggtcgaa
gaggtgctgctccgtgcagatggcgtggccgaggtggccgtgatcggcgaagtcgacgca
gaatggggcgaggtggtcgtggcctatgtcgtctgcacgcccggcgtgacgctcgatagt
gcgatgctggatgcgtattgcctcgaacacatcgcgcggttcaagcgccctaaacgctac
gtcgccgtggacgccctaccgaagaaccactacggcaaggtcttgaaaacagcgttgcga
acgctctga

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