Pandoraea commovens: NTU39_07715
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Entry
NTU39_07715 CDS
T08365
Name
(GenBank) RraA family protein
KO
K10218
4-hydroxy-4-methyl-2-oxoglutarate aldolase [EC:
4.1.3.17
]
Organism
pcom
Pandoraea commovens
Pathway
pcom00362
Benzoate degradation
pcom00660
C5-Branched dibasic acid metabolism
pcom01100
Metabolic pathways
pcom01120
Microbial metabolism in diverse environments
Brite
KEGG Orthology (KO) [BR:
pcom00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00660 C5-Branched dibasic acid metabolism
NTU39_07715
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
NTU39_07715
Enzymes [BR:
pcom01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.3 Oxo-acid-lyases
4.1.3.17 4-hydroxy-4-methyl-2-oxoglutarate aldolase
NTU39_07715
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Gene cluster
GFIT
Motif
Pfam:
RraA-like
HupF_HypC
Glyco_transf_11
Motif
Other DBs
NCBI-ProteinID:
UVA80875
UniProt:
A0ABY5QLY9
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All DBs
Position
1600682..1601362
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AA seq
226 aa
AA seq
DB search
MNASADAVSRLRKLDACAVSDALDKLGLPSTVCHLPHRSGARRIAGRAVTVKLVAVADVP
PTTGAPRHLGTTAVMQAGTDNIIVVEQRTGLDAGSWGGILSLAAVQRGVAGVVADGPVRD
IDEARDYDLPVFCRALTARTARARVAEAGTNVPICVDGVDVRPGDYVIADNSAVVFVAVS
DIERVLAAAEQIAAREAAMAKALLAGQPVTDVMGASYEHMLHDGAA
NT seq
681 nt
NT seq
+upstream
nt +downstream
nt
atgaatgcttctgccgacgccgtctcccgactgcgaaaactcgatgcctgcgccgtatcg
gatgccctcgacaaactcggtctgcccagtactgtctgtcatctgccgcaccgctcgggc
gcacgccgcattgccgggcgcgcggtgacggtgaagctggtggcggttgccgatgtaccg
ccgacgacaggcgcgccgcgccacctgggcacgacggcggtcatgcaggcgggcacggac
aacatcatcgtcgtggagcaacgcaccggactcgatgcggggagttggggcggcattctc
tcgctggcggccgtgcagcgcggcgtggccggtgtggtcgccgatggtccggtgcgcgac
atcgacgaggcgcgcgactacgacctgccggtgttctgtcgggcactgacggcacgcact
gcgcgcgctcgcgttgccgaggcggggaccaatgtgcccatttgcgtggatggcgtggat
gtccgtccgggcgactacgtgatcgccgacaacagtgccgtcgtcttcgtggcggtgagc
gacatcgagcgcgtgctggcggctgccgaacaaatcgccgcacgcgaggccgcgatggcg
aaagcactgctcgccgggcagcccgtgaccgatgtcatgggggcgagctacgaacacatg
ttgcacgacggcgcggcataa
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