Pandoraea commovens: NTU39_08065
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Entry
NTU39_08065 CDS
T08365
Name
(GenBank) citrate synthase
KO
K01647
citrate synthase [EC:
2.3.3.1
]
Organism
pcom
Pandoraea commovens
Pathway
pcom00020
Citrate cycle (TCA cycle)
pcom00630
Glyoxylate and dicarboxylate metabolism
pcom01100
Metabolic pathways
pcom01110
Biosynthesis of secondary metabolites
pcom01120
Microbial metabolism in diverse environments
pcom01200
Carbon metabolism
pcom01210
2-Oxocarboxylic acid metabolism
pcom01230
Biosynthesis of amino acids
Module
pcom_M00009
Citrate cycle (TCA cycle, Krebs cycle)
pcom_M00010
Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate
pcom_M00012
Glyoxylate cycle
Brite
KEGG Orthology (KO) [BR:
pcom00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
NTU39_08065
00630 Glyoxylate and dicarboxylate metabolism
NTU39_08065
Enzymes [BR:
pcom01000
]
2. Transferases
2.3 Acyltransferases
2.3.3 Acyl groups converted into alkyl groups on transfer
2.3.3.1 citrate (Si)-synthase
NTU39_08065
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Gene cluster
GFIT
Motif
Pfam:
Citrate_synt
HTH_17
MerR_1
MerR
Phage_capsid_2
Motif
Other DBs
NCBI-ProteinID:
UVA80944
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All DBs
Position
1677815..1679128
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AA seq
437 aa
AA seq
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MTPQTDLMTREEVLALLDIKPATLYAYVSRGLIRARPHEDGRKSLYLRRDVERLATRKRG
RAPTGAVAESTMRFGDPVLHSAITQITPHGPRYRNRLAIDLASGGASFESVVHLLMTGIW
QDGIAEWPMQETPSDVLRFLATYDGEVASADIGNLLGMVPFALAMHGRGARELADGTAVQ
AARAMLHCMVGCVGFLGPKQCFVARETGEGVASHVLRAAGSAVTPARLRAMNAALVVLAD
NELAPATFSARVAASTNADLFGCVAAAIGSHIGFTTGTSTEKIETMLLCEPFDALDSRVG
RVREYGASLLGFNHPLYPGGDARADLMMQMAGELMRETDDVTIDDAMRTNTRLTLDFLER
MRTEVNAHAGLATGLVALARALGLPDGTSTAMWIIGRSAGWVAHVMEQRTQAFMLRPRAK
YGFGGPVTAETFESFEK
NT seq
1314 nt
NT seq
+upstream
nt +downstream
nt
atgacgccgcaaaccgacctgatgacgcgcgaagaagtcctggcgctactcgatatcaaa
ccggccacgttgtacgcctacgtgagccggggattgattcgggcgcgtccgcatgaggac
ggtcgcaagagcctgtatctgcgtcgcgacgtcgagcgtctggccacgcgcaagcgcggg
cgcgcgccgaccggtgcggtggccgaatccaccatgcgcttcggcgatcccgtgctgcat
tcggccatcacccagatcacgccgcacggtccgcgctatcgcaaccgtctggcgatcgat
ctggcgagcggcggggcgtcgttcgagtcggtggtgcatttgctgatgacgggaatctgg
caggacggcattgccgaatggccgatgcaggaaacgccgtccgacgtgctgcgctttctg
gcgacgtacgacggcgaagtggcgagcgctgacatcggcaatctgctcggcatggtgccg
ttcgcgctcgcgatgcacggacgcggcgcacgcgagctggccgacggcaccgccgtgcag
gcggcccgcgcgatgctgcattgcatggtcggatgtgtggggtttctcgggccgaagcaa
tgcttcgtcgcacgcgagaccggggagggcgtcgcatcgcatgtgctgcgtgcggcgggc
agcgcggtgacacccgcacgactgcgggcgatgaatgccgcactggtcgtgctggccgac
aacgaactcgcaccggcgacgttttcggcgcgggtcgcggcgtccaccaatgcggatctg
ttcggctgcgtcgcggcggccatcggttcgcatatcggcttcaccaccggcaccagcacc
gaaaagatcgagacgatgctgctgtgcgagccgttcgatgcgctcgactcgcgcgtcggc
cgagtgcgcgaatacggcgcgagcctgctcgggttcaatcatccgttgtatccgggcggc
gatgcacgtgccgatcttatgatgcagatggcaggcgaactgatgcgcgagacggacgac
gtcaccatcgacgatgcaatgcgcaccaacactcgtctgacgctcgactttctcgagcgt
atgcgcaccgaagtaaacgcgcatgccgggttggcgacgggactggtcgcgctcgcccgt
gcgctgggactgccggacggtacgtcgacggcgatgtggatcatcggccgttcggcgggc
tgggtggcgcacgtcatggagcagcgcacgcaggcgttcatgctgcgaccgcgtgcgaag
tacggcttcggcgggccggtgactgcggaaaccttcgagtcgttcgaaaaatag
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