Pandoraea commovens: NTU39_08290
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Entry
NTU39_08290 CDS
T08365
Name
(GenBank) ABC transporter permease
KO
K02054
putative spermidine/putrescine transport system permease protein
Organism
pcom
Pandoraea commovens
Pathway
pcom02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
pcom00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
NTU39_08290
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pcom02000
]
NTU39_08290
Transporters [BR:
pcom02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Putative spermidine/putrescine transporter
NTU39_08290
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Paralog
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GFIT
Motif
Pfam:
BPD_transp_1
Motif
Other DBs
NCBI-ProteinID:
UVA80986
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All DBs
Position
1728797..1729624
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AA seq
275 aa
AA seq
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MHKFRPYLLLAPLAIFLTAFFLVPLAQVLWLSFTEPTPGLANYVHFFADPFYLRVLGMTF
LTSLLVTACCLTLGYPLAYCLAQATARFGAGILLVVGMSYWTSFLVRSYAWMIILGNSGP
VIGLLRAMGVQTPPELLFTRFSSTLGMVHALLPLMTITLYSVMKKIDPALVKAAANLGAN
RFAAFRAVFLPLSLPGIVNGCTMVFIVSLGFYVMPVLLGSPSEQMMAGLIGQQMEEFGNF
GDASAMAVVLACTTLSLYALYNRFFGLDKLWSKGK
NT seq
828 nt
NT seq
+upstream
nt +downstream
nt
atgcataagtttcgcccgtatctcttactcgcgccgctggcaatatttttgacggcgttc
tttctggtgccgctcgcgcaagtgctttggttgagtttcacggagccgacgcctggcttg
gccaactacgtgcacttctttgcggatccgttctaccttcgcgtactcggcatgacgttc
ctgacgtcgctgctcgtgaccgcgtgctgtctgacgctgggctatccgctcgcttactgc
ctcgcgcaggccacagcgcggttcggcgcgggcattctgctggtcgtgggcatgagctac
tggacaagtttcctcgtccggagctacgcgtggatgatcattctcggcaatagcggtccg
gtcatcggcctgttgcgggcaatgggcgtgcagacgccacccgagttgctcttcacgcgc
ttctcgtcgacgctgggcatggtgcacgcgctgctgccgctcatgaccatcacgctgtac
tcggtcatgaagaagatcgatccggcgctggtcaaggcggctgccaatctcggtgccaat
cgattcgcggctttccgggccgtgtttctaccgctttcgctgccgggcatcgtcaacggc
tgcacgatggtattcatcgtttcgctgggcttttacgtgatgcctgtgctgctcggcagt
ccaagcgagcagatgatggccggactcatcggtcaacagatggaggagttcggcaatttc
ggcgacgcttccgccatggcggtagtactcgcgtgcacgacgctcagtctgtacgcgctc
tataaccggttcttcggtctcgacaaactctggagcaaaggcaaatga
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