Pandoraea commovens: NTU39_08890
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Entry
NTU39_08890 CDS
T08365
Name
(GenBank) LysR family transcriptional regulator
KO
K21703
LysR family transcriptional regulator, low CO2-responsive transcriptional regulator
Organism
pcom
Pandoraea commovens
Brite
KEGG Orthology (KO) [BR:
pcom00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pcom03000
]
NTU39_08890
Transcription factors [BR:
pcom03000
]
Prokaryotic type
Helix-turn-helix
LysR family
NTU39_08890
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LysR_substrate
HTH_1
MarR_2
HTH_24
Motif
Other DBs
NCBI-ProteinID:
UVA81093
LinkDB
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Position
complement(1884323..1885279)
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AA seq
318 aa
AA seq
DB search
MKHATLRQLKVFEAVARHLSFSRAAEELHLTQPAVSTQVKQLETHVGLPLFEQLGKKIFL
TPAGAEMLHYSRAIIALFRETEEAMDHLKGITGGKLNVAVISAGDYFFPRLLAAFTARYP
GVTLNLTVHNREELLHQLTENLTDLAVMVRPPHEIDTINEAFAPHPYIIVAPPGHALAGQ
KQIPFSRLTQEPFISRERGSDTWNSLQDAFGHRTQQLKIAMEISSTETIKQAVIAGMGIS
FLSAHTVGMELQTGQLTVLDVQGFPAWQSWYVVHRRSKRLPPVALAFRQFLLSEGAALID
GMMAYKSTVPPPSGSDTK
NT seq
957 nt
NT seq
+upstream
nt +downstream
nt
atgaaacacgccacactccgtcagctgaaagtcttcgaagccgtggcgcgccatctgagc
ttttcgcgcgcggccgaagaacttcacctcacacaaccggccgtctcgacgcaggtcaag
cagcttgaaacacacgtcggactgccgctcttcgagcaactgggcaagaaaattttcctg
acgcccgcaggcgccgagatgctgcattacagccgcgcgatcatcgccctctttcgcgaa
accgaagaggcgatggatcacctcaaaggcattaccggcggcaaactcaacgtggccgtc
atcagcgcgggcgactacttcttcccgcgcctgctggcagcgttcaccgcacgctatccc
ggcgtcacgctcaacctcacggtgcataaccgcgaggaactgttgcaccagttgaccgaa
aacctgaccgatctggcggtgatggtgcgtccgcctcacgagatcgacacgatcaacgaa
gctttcgcgccgcacccttacatcatcgtggccccgcccggtcatgcgctggccggtcag
aagcagattccgttctcacggctgacgcaagaaccgttcatcagccgggagcgcggctcc
gacacctggaattccttacaggacgctttcggtcatcgcacacagcaactgaaaattgcg
atggaaatttccagcacggaaacgatcaagcaggcggtgattgcgggcatggggatcagc
ttcctgtccgcgcacaccgtcggcatggagttgcagacggggcagttgacggtgctcgac
gtgcagggctttccggcatggcaaagctggtacgtcgtgcatcgccgcagcaaacggctg
ccgccggtcgcactcgctttccgtcagttcctgctctcggaaggcgcagcgctgatcgac
gggatgatggcctacaaaagcaccgtgccgccgccctcaggcagcgacacgaaatag
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