Pandoraea commovens: NTU39_10380
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Entry
NTU39_10380 CDS
T08365
Name
(GenBank) hypothetical protein
Organism
pcom
Pandoraea commovens
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RHS_repeat
Motif
Other DBs
NCBI-ProteinID:
UVA81377
LinkDB
All DBs
Position
2206102..2211108
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AA seq
1668 aa
AA seq
DB search
MDEPVRERSQADHNALYSGAQSFLSFLEKGVDPRTGVYTVRVALPPISMNALAGPELKLS
LGFDPLQNVDVGLGRGWSWGFSQLQPAAKRLRLSDGETHLAIMTDASITLPDQKLPTAII
EKHATRVVVTYRSGQREILEPFRPSDPLTPWVPVEIVSPHGRSVYLTWQAFEGEPALATM
RDQDRGELLRVTRTGLAVSITVAGPIPVVYEMTLSGDLVSSIRLPLPGQPRWVFNYERLT
DADLAFLTEVRSPTGSVERMAYRTDGHRFPSRSNEAPGTPPSHLPYVVRHVIDPGADQPS
RVTTYTFSTNNFLGYGAGVDWEDASDGLYKVRTDYRYWSTESQIDESVEPPRVLGTVYRE
FNRFHLLMEERREEDGCEQTTLNTYHDVTGAPYDEQPAIVQLPKVEIVRWRRDGVARDEI
TTHRYDTWGNPIEVVMPDRVTELTEYYDPAGEDGCPPDPVWKTPRSVKSRTMVPGEPTPR
APGMKPTALAPTRVQQFRYASYPSLVSGAADFLAVSEQRQLADGDVFDEVSFAYFNNPTS
ALLHGRARQRAQTLIGHTTTTDYTYAKANDELVTTRRQHTDFDDTDSTTITHTSIHTGLD
TLVQGNDAIVVTQYDVLGRVVEESTTPTSGDTTYTATLRHVYTLMGETGGVVSQQTTRDS
GIVDTAYFDGTGLTVRTTRSDPDIAGGDVLEVMRYEFDTRGRKIQSTTTDRIEGEPLVTT
MHFAYDGWGRCCAVTRPDGVIEHDEWNAVTQTETSWLEGGEERSGVTARTYNRFAEIEKE
TRTDTSRSLVSQWTFAYDGLGRRVSALDSSRRETTYTYDFADRTSHVDLGDGDTFDYAYA
PHSLDNSATQVCVNGTEVGARTFDGQMRVTDQTVGGRTTSWSFQLDRRHPTEQTNAAGQK
LTFTLNPSLTEVPRQRVAGAVQTDYGHDPNTGLLVGASLAGATYGCERYATGFPHIETWT
DEAGERQSTYEWTSLGLPASCEDAAGNIHCYRYNASTGQLMEYTCGDVVVEYLWNPLGRL
CKQTVRQAGTLRLTTTLGYDDFGRETSRETIAPGRTALVLTQGYNDLDLLVNRTRTEGGT
LRLREGMAYDRRDRLEAYYTEGPESAPDPHDPSQRISVQQWKHDAFDNVAEILTWHYGVS
TPAAVTFHFESDDDPTLLTAFERRGYGAADGRFTLGYDAAGRVTDDGLGNTYTYNEQDQM
MSAQRSGQAPTEYGYNPLDEQSVVAQAGQPTRRRIFRRNRLAVEVQGTLTRSYLDGTGGT
LDSAGQLLAYATDTKSSVMEVHSGSDATRGIVYSPSGYRRADVPDGVPGQDGEIVDPATQ
GLWLGNARLYSPVLCRFLVPDTDVPFDGGGVNAYARLDPLNSIDPSGHIPSWLGGIITAL
TAVIGIVATIYSAGLLTPLTSAMVTTTAGATAGAGAVATGTSAAVGVGVPAATAATSSAS
LATTISANFAALGTVSQMSLISTTSVNAAIFGLGTGSAAAAADGSDDLSAQLGLAATVLG
AFDIIAGFGFAFANARVAARAANLAEDGTRGTLTGNDSVLSRPASRSRSSTPTGNAGGSG
ASGSRSTSGSPPPIRSLSRLSRISEESEWSISSLSSGPRSPSPPPVPNVNAFMLTQMAGH
TAAVVARSQSGSRATSPTSNGGSPTSSVRSRASDLPRVIQVHYKRDRN
NT seq
5007 nt
NT seq
+upstream
nt +downstream
nt
atggacgagccagttcgtgaacgttctcaggcggaccacaacgcgctgtattccggggca
caaagttttctgagcttcctcgaaaagggtgtggacccgcgaaccggcgtctacaccgtt
cgcgttgcgttgccccctatatccatgaatgcgttggcaggaccggagctgaaactctcg
ctcggctttgatccgttgcagaacgtcgacgtcggactcggtcggggctggagctggggc
ttctcgcaactgcaacccgccgccaagcgtttgcgactgtcggacggtgagacgcacctc
gcgatcatgacggatgcgagcattacgctccccgaccagaagctgcccaccgccatcata
gagaagcacgctacgcgcgtggtggtgacctatcgttcggggcaacgcgagattctggaa
cccttccggccgtcggatccgctcaccccgtgggtgccggtggagatcgtgtcgccgcac
gggcgatcggtgtacctgacgtggcaggcgttcgagggtgagccggcactggctacgatg
cgcgatcaggaccgtggggagttgctgcgcgtgacacgcacggggctggccgtttccatc
acggtcgccgggccgataccggtcgtctatgagatgacgctcagcggcgacctcgtgtct
tcgatccgcctcccgctccccggtcagcccagatgggtgttcaactacgaacgtctgacc
gatgccgatctcgcgttcctcaccgaggtgaggtcgccgaccggaagtgtagagaggatg
gcttacagaacggacggccatcgctttccgtcgcgctcgaacgaagcaccgggcacgcca
ccgtcccatcttccttacgtggtgcgccatgtgatcgacccgggtgccgatcagccttcg
cgcgtgacgacgtacaccttctcgacgaacaatttcctaggctatggcgcgggtgtcgac
tgggaagatgcctccgacgggctttacaaggtcaggacagattatcgctattggtcgacc
gaatcgcagatcgacgaatccgtcgagccaccgcgggtgctgggcacggtgtaccgcgag
ttcaatcgctttcacctgctcatggaggaacggcgcgaagaggacggttgcgaacaaacc
acgttgaatacctatcacgacgtgacgggcgcgccctatgacgaacagcctgccattgtg
caattgccaaaagtggagatcgtgcgctggcgtcgcgacggggtggcgcgcgacgagatc
acgacccaccggtatgacacgtggggtaaccccatcgaggtcgttatgccggaccgtgtc
actgagctgaccgagtactacgatcctgctggcgaggacggatgcccgcccgaccccgtg
tggaagaccccgcgctctgtgaagtcgcgcacgatggtgccgggtgaaccgacgcctcgc
gcccccggcatgaagccgacagcactggcgccgacgcgggttcagcaatttcggtacgcg
agctatccgtcgctcgtatccggtgcggccgattttctggccgtgagtgagcaacggcaa
ctggcggatggagatgttttcgacgaggtgtcgttcgcgtacttcaataatccgacgtcg
gcgctgttgcatgggcgcgcacgtcagcgtgcgcagaccctcatcgggcacacgactacg
accgactacacctatgcgaaggcgaacgacgaactggtgacgacgcgcaggcagcatacc
gatttcgacgacaccgatagtacgaccatcacgcatacgtcgattcacaccggactggac
acccttgtgcagggcaacgatgcaatcgtcgtgacgcaatatgacgtgcttggccgggtg
gtcgaggaatcgacgacgccgacatcgggagataccacctacaccgccacgttgcggcat
gtatatacgctcatgggcgaaaccggtggtgtggtgtcgcagcagacaacccgcgattcg
ggcatcgtcgataccgcctacttcgatggcaccggattgaccgtgcgtaccacacgaagc
gacccagacatcgccggaggtgatgtgctggaggtgatgcgatacgagttcgacacgcgt
ggccgcaagattcaaagcacgacgaccgatcgcattgagggtgagccgctggttaccacc
atgcacttcgcctacgacggatggggacgttgctgtgccgtcacgcgaccggacggcgtg
atcgaacacgacgagtggaatgccgtgacgcaaacggagacaagttggctcgagggcggc
gaggaacgttccggggtcacagcgcgtacgtacaacagatttgccgagatcgaaaaggag
acacgcaccgatacgtcgcggagtctggtgagtcaatggaccttcgcctacgacggattg
ggccgtcgcgtcagcgcgctcgactcgtcacgcagagagacgacgtacacctacgacttt
gcggatcgtacgagccacgtcgatctcggcgatggtgatacgttcgactacgcctacgca
ccgcattcgctcgacaacagcgcgacacaagtgtgtgtgaacggcaccgaggtcggggct
cgcacgttcgatggtcagatgcgcgttaccgaccagacggtaggagggcgcactacgagc
tggtcgttccagctcgatcgcaggcatccgacagaacagaccaacgccgcgggacagaag
ctgactttcacgctcaatccctcgctgaccgaggtgcctcgacagcgtgtggcgggagct
gtgcaaaccgattacgggcatgatccgaacactggattgctcgtgggggcatcgcttgca
ggagccacctatggttgcgagcgctacgcaaccggttttcctcatatcgaaacgtggaca
gacgaggcgggcgaacgtcagtcgacttacgaatggacttcgctcggtctgcctgcctcg
tgtgaggatgctgcgggcaacatccattgctatcgctacaacgcgtccaccgggcagttg
atggagtacacctgtggcgatgttgtcgtggagtatttatggaacccgcttggccgattg
tgcaaacagaccgtgcggcaggccggtacgttgcgtctgacgacaacgctcggatacgac
gacttcggtcgcgagacgtcgcgtgagacgattgcgccggggcgcaccgcgctcgtgctg
actcaggggtacaacgatctcgatttgctggtcaaccgcacgcgtacagagggcggcacg
ctgcgattgagggaggggatggcctacgaccggcgcgaccggctcgaggcctactacacc
gaagggcccgaaagtgctcccgatccacacgatccttcacaacggatttcggtgcagcag
tggaagcacgacgctttcgacaatgtggccgaaatcctgacgtggcactacggggtgagc
acgcccgccgcggtgacgtttcacttcgaaagcgacgacgatcctactctgctcacggcg
ttcgagcggcgtggttacggtgctgcggatgggcgtttcacgcttggctacgacgcggca
ggtcgcgtgaccgacgacggcctgggcaacacctacacgtacaacgagcaggatcagatg
atgtccgcccagcgtagcggacaggcaccgaccgagtatggctacaacccgctcgacgaa
cagtcggtcgtcgcgcaggcgggccagccgacgcgtcgacggatattccgccgcaaccgg
ttggccgtggaagtgcagggcacgctcacgcgtagttatctcgacggcaccgggggcacg
ctggactccgcaggacagttgctggcgtacgccaccgataccaagtcgagcgtgatggaa
gtgcactcgggcagcgacgcgacgcggggtatcgtgtactccccaagcgggtatcgtcgc
gccgatgtcccggacggcgttcccggtcaggatggagagattgtcgatccggcgacacag
ggtctctggctgggcaatgcacgattgtattccccggtgctgtgtcgctttctggtgccc
gataccgatgtcccgttcgacggcggcggcgtcaacgcctacgcgcgccttgatccgctc
aactcgatcgacccgtccggacacatcccgtcgtggctgggtgggattatcacggcgttg
accgccgtgataggcatcgtggccactatctattcggcggggctgctgacgccgttaacc
agtgcaatggtgacaacgacggcgggggcgacggcaggcgcaggcgccgtggcgacggga
acatcggcggctgtaggggtcggcgtgccagccgcaactgccgcgacatcgagcgcttcg
ctcgccaccaccatatccgcgaacttcgccgcgctgggcacggtgtcgcagatgtcgctt
atcagcaccacgagcgtcaatgcggcgatctttggactcggcacggggagcgctgccgcg
gcggctgacgggagtgacgatctttcggcccaattgggccttgcggcgaccgtactaggc
gctttcgacattatcgcgggtttcggatttgccttcgccaacgcacgcgtggcagcgcgt
gcagcgaatcttgccgaggacggcacacgaggcactctgacgggaaacgattcggtgctg
agtcgaccggcgagcaggtccaggtccagtacgccgacaggcaatgccggcggcagcggg
gccagcggttctcgcagcacaagcggttctccgcctccgattcgctcgttatctaggttg
agtaggatcagcgaggaatctgagtggtcgatcagctctttgtcaagcgggccacgctcg
ccttcgccccctccagtaccaaacgtcaacgccttcatgttgacccaaatggccggccac
acagcggcagtcgtcgcacgctcccagtcgggatcccgtgcgacttctccgacgagcaac
ggaggttcgcccacgagctcggtgcgttcccgcgcgtccgacctcccgcgtgtgattcaa
gtgcattacaagcgggaccggaactga
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