Pandoraea commovens: NTU39_10490
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Entry
NTU39_10490 CDS
T08365
Name
(GenBank) type I secretion system permease/ATPase
KO
K11004
ATP-binding cassette, subfamily B, bacterial HlyB/CyaB
Organism
pcom
Pandoraea commovens
Pathway
pcom02010
ABC transporters
pcom03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
pcom00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
NTU39_10490
03070 Bacterial secretion system
NTU39_10490
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pcom02000
]
NTU39_10490
02044 Secretion system [BR:
pcom02044
]
NTU39_10490
Transporters [BR:
pcom02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
NTU39_10490
Secretion system [BR:
pcom02044
]
Type I secretion system
alpha-Hemolysin/cyclolysin transporter
NTU39_10490
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
Peptidase_C39
ABC_ATPase
SMC_N
AAA_29
AAA_16
AAA_22
AAA_18
RsgA_GTPase
NB-ARC
PRK
AAA_21
DUF87
Motif
Other DBs
NCBI-ProteinID:
UVA81398
LinkDB
All DBs
Position
2234510..2236687
Genome browser
AA seq
725 aa
AA seq
DB search
MPTPCPTSELPPESEIDRSESEANAVFDSGLASLVLVARFHDLSVDAAQISHQYSVDGRP
LTKDAILLAATQLGLKAKAVKPTSDRFAHTSLPAIAFANDGTSLVLARCDGVKVLIQDPS
QNRPKTLTLAEFSEQTTGELIVFASRASLAGDMAKFDFSWFIPAIVKYRRLLAEVMLVSF
VLQLFALATPMFFQVVMDKVLVHRGLSTLDVIAIGLLTVVIFEVVLTALRTYVFSHTSSR
IDVELGARLFRHLLNLPLGYFQARRVGDSVARVRELENIRAFLTGNAVTLVLDLVFSVAF
LAVMFHYSVTLTWIVVGSLPCYVALTLVFTPPLRSRLNEKFNRGAENQAFLVETISGIQT
VKALAVEPQWVRKWDKQLAAYIRSSFRTAMVGTVANSGVSFVSKVVTVATMYVGAKQVIE
ADMTVGQLIAFNMLAGHVTTPVMRLAQMWTDFQQTGISVQRLGDILNAKTEVSGAKSVLP
AIRGAVRFERTTFRYRSDSPEVIKAIDLDIRPGEVIGVVGRSGSGKSTLTKLIQRLHVPE
SGRVMVDGVDLALIDASSLRRQVGVVLQESVLFNGTVRENIALVTPGAPLSKVMRIASLA
GAHEFITELPEGYDTLVGEHGATLSGGQRQRIAIARALMADPRILIFDEATSALDYESER
VIQNNMRAICQGRTVLIVAHRLSAVWGANRIVVMERGGIVEIGAHEDLLRNPEGIYTKLH
CMQRG
NT seq
2178 nt
NT seq
+upstream
nt +downstream
nt
atgccgacaccatgtccaacgtccgaattaccaccagaaagcgagatcgacaggtctgaa
tccgaggccaatgccgtctttgactcgggcttagcttcactcgtcttggttgctcgattt
cacgatctgtctgtcgatgctgcacagataagccatcaatactccgtggatgggcgccca
ctaacgaaagacgcaattcttcttgccgcaacacaactcgggctaaaagcaaaggcagtc
aaaccgacttcagaccgcttcgcgcatacctcgttgcccgcaatagcttttgcgaatgat
gggacatctctcgttttggcgcggtgtgacggcgtcaaggtattgattcaagatccgagc
caaaaccgtcctaaaacgttgacgctcgctgaattttcggagcaaaccaccggcgaatta
atcgtttttgcgtcgcgcgcctcgttggctggggacatggcgaaattcgacttttcgtgg
tttatccccgccatcgtgaaatacaggcggctgcttgccgaggtaatgctcgtttccttc
gtcttgcagttgtttgccttggcgacgccaatgtttttccaggtcgtcatggacaaggta
ctcgtccatcggggcttgagtacgcttgacgtaatagcgataggtctgctgacagtcgtg
attttcgaggtcgtactgaccgcgcttcgcacctatgtgttttcccataccagcagtcgg
attgacgttgaactcggcgcccggttgttcaggcatctcctgaaccttcctctcggctac
ttccaggcgagacgcgtcggtgattccgtcgctcgtgtgcgtgaactggagaacatccgg
gcattccttactgggaatgccgtcacgttggtccttgatctagtgttttcggtggccttt
ctcgcagtcatgttccattacagcgtgacattgacatggatcgtcgtcggatcgctgcct
tgctatgtcgcgttgacacttgttttcaccccgccactgcgttcccggttgaacgagaag
ttcaatcgaggggcggaaaatcaagcgtttctggtcgagacgatcagtgggatccagacg
gttaaagcactggcggtagaaccgcaatgggtgcggaaatgggacaagcagcttgccgct
tacattaggtcgagtttccgaaccgcgatggtgggtaccgtcgcgaatagtggcgtgtca
ttcgtgagcaaggtcgtaacggttgccacgatgtatgtgggtgcgaagcaggtgattgaa
gccgacatgacagtcgggcaattgatcgctttcaacatgctggcggggcacgtgaccacg
ccggtaatgcgcttagcccaaatgtggacggattttcagcaaaccggaatctccgtgcag
cgattgggcgacatccttaatgccaaaactgaggtgtcaggtgccaagagcgtgctgccc
gcgatacgtggggctgttcgcttcgaacgcacgacctttcgctatcgatccgactctcct
gaggtgatcaaggccattgatctcgatatccgaccaggagaggtcatcggtgttgtcggg
cgctccggttcaggcaaaagcacgctcacaaaactcattcaacgcttgcatgttccggag
agcggccgagtcatggtcgatggcgtcgatctggccctgatcgatgcgtcctctttacgc
cgacaggttggtgtcgtactgcaggagagcgttctatttaatggcaccgtgcgtgaaaac
attgcactcgtaacgccaggcgctccgttatccaaggtgatgcgcatcgcgtcgcttgcg
ggggcccatgagttcatcaccgagctacctgaaggatatgacacgctggtcggggagcac
ggtgcgacgctctccggcgggcaacggcagcgcatcgcgattgcgcgtgccctgatggcc
gatccccggattctgattttcgacgaagcgacgagtgcgctcgactacgagtcggagcgc
gtcattcaaaacaatatgcgggcgatttgccaggggcgcaccgttctcatcgtggcacat
cgattgtctgcggtgtggggcgcaaatcgaatcgttgtgatggagcgaggagggatcgtg
gagattggtgcacacgaagacctattgcgaaatccggaaggcatctacacgaagttgcac
tgcatgcagcggggttga
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