Pandoraea commovens: NTU39_10750
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Entry
NTU39_10750 CDS
T08365
Name
(GenBank) endonuclease III domain-containing protein
KO
K01247
DNA-3-methyladenine glycosylase II [EC:
3.2.2.21
]
Organism
pcom
Pandoraea commovens
Pathway
pcom03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
pcom00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
NTU39_10750
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pcom03400
]
NTU39_10750
Enzymes [BR:
pcom01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.21 DNA-3-methyladenine glycosylase II
NTU39_10750
DNA repair and recombination proteins [BR:
pcom03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
NTU39_10750
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
Motif
Other DBs
NCBI-ProteinID:
UVA81448
LinkDB
All DBs
Position
2298857..2300011
Genome browser
AA seq
384 aa
AA seq
DB search
MVTRKSVAAKVATGTPAAKRSAKGSTTAKPVSAPVDGARRSPLKSTGSSASTATRTAAVK
VTTKPTGKTAAGKTAKAPAKSSGVGAARKASVSKAGKVEKVEKVVAKKAASKAPVKTPRK
TAAKPNAKPDASSAATTRRVIAKRDGETRIVTPEIERLEHEVVEQAVTGVVPLPVAPGAT
RPDFWDQACADLMKRDRILKKLIPQFGPAHLTGRGEPFVTLARSIVGQQISVKAAQAVWD
RVVAICPKLSPSQFIKAGHDALAGCGLSRRKAEYILDLATHFKSGVLHVDAWASMDDEAV
IAELTGIRGIGRWTAEMFLMFNLLRPDVLPLDDVGLINAISVNYFSGEPVTRSEAREVAA
NWEPWRSVATWYMWRSLEPVPVEY
NT seq
1155 nt
NT seq
+upstream
nt +downstream
nt
atggtgactcgtaaatccgtagccgcgaaggtcgcaaccgggaccccggcggccaagcgt
tcggcaaaaggttcgacgacggcgaagccggtgtcggcaccggtcgacggcgcgcgtcgc
agtccgctgaagtcgaccggttcgagcgcgtcgacagcgacgcgaacggcggccgtcaag
gtgacaaccaagccgaccggcaagaccgcggcgggcaagaccgcaaaggcgcctgcgaag
tcgtccggcgtgggcgcagcccgcaaggcgtcggtgtcgaaggccgggaaggtcgagaag
gtcgagaaggtcgtcgcaaagaaggccgcttcgaaggcgcctgtgaagacgccgcgcaag
accgccgcgaagccgaacgcaaagccggacgcgtccagcgcggccaccacgcggcgcgtt
atcgccaagcgcgacggcgagacgcgcatcgtcacgccggagatcgaacgtctcgaacat
gaggtggtcgagcaggcggtgacgggcgttgtgcccttgccggttgcgccgggcgccacg
cgtcccgacttctgggatcaggcgtgtgccgatctcatgaaacgcgatcggattcttaag
aagctgattccccagtttggcccggcgcatctgaccggacgcggcgagccgttcgtcacg
cttgcgcgctcgatcgtgggccagcagatttccgtgaaggcggcgcaggctgtgtgggat
cgcgtcgtggcgatctgcccgaagctttcgccgtcgcagttcatcaaggcagggcacgat
gcgctcgccgggtgtgggctgtcgcgtcgcaaggccgagtacattctcgatctggcgaca
catttcaagtccggcgtgctgcacgtggatgcgtgggcgagcatggacgacgaggcagtc
attgccgagctgaccggtatccgaggcatcggccggtggacggcggaaatgttcctgatg
ttcaacctgctgcgtcccgacgttctgccgctcgacgatgtcgggctgatcaacgccatc
agcgtcaactatttcagcggcgagcctgtcacgcgaagcgaagcacgcgaagtcgctgcc
aattgggagccctggcgctccgtcgccacgtggtacatgtggcggagtctcgaacctgtg
ccggtcgaatattga
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