Pandoraea commovens: NTU39_10865
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Entry
NTU39_10865 CDS
T08365
Symbol
dnaX
Name
(GenBank) DNA polymerase III subunit gamma/tau
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
pcom
Pandoraea commovens
Pathway
pcom03030
DNA replication
pcom03430
Mismatch repair
pcom03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pcom00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
NTU39_10865 (dnaX)
03430 Mismatch repair
NTU39_10865 (dnaX)
03440 Homologous recombination
NTU39_10865 (dnaX)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pcom03032
]
NTU39_10865 (dnaX)
03400 DNA repair and recombination proteins [BR:
pcom03400
]
NTU39_10865 (dnaX)
Enzymes [BR:
pcom01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
NTU39_10865 (dnaX)
DNA replication proteins [BR:
pcom03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
NTU39_10865 (dnaX)
DNA repair and recombination proteins [BR:
pcom03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
NTU39_10865 (dnaX)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
DNAX_ATPase_lid
DNA_pol3_gamma3
AAA
DNA_pol3_tau_5
RuvB_N
AAA_16
AAA_22
AAA_5
AAA_18
AAA_14
AAA_30
AAA_2
TsaE
nSTAND3
DUF3646
AAA_19
AAA_28
PIF1
AAA_assoc_2
RsgA_GTPase
Herpes_Helicase
SKI
Glyco_tranf_2_5
Rad17
Motif
Other DBs
NCBI-ProteinID:
UVA81467
UniProt:
A0ABY5QKY8
LinkDB
All DBs
Position
2325220..2327145
Genome browser
AA seq
641 aa
AA seq
DB search
MTYQVLARKWRPKGFSTLVGQEHVVRALTHALEQQRLHHAYLFTGTRGVGKTTLSRILAK
ALNCETGITAEPCGVCKACKAIDEGRFVDYVEMDAASNRGVDEMTSLLEKAVYAPADARF
KVYMIDEVHMLTGHAFNAMLKTLEEPPAHVKFILATTDPQKIPVTVLSRCLQFNLKQMPA
GHIVSHLTNILGEEGIENEPQALRLLAKAAGGSMRDALSLTDQAIAYAAGPLTETAVRGM
LGAIDQSVLVRLLDALKDESRTDLLAIADEMAERSFSFASGLQDLGSLLHKIALAQYAPQ
AVSDDWPEAADVRRLAQALSPEAVQLYYQIATRARGELGLAPDEYTGFSMALLRMAAFTP
LLAGGTLAEPPTPQAAGAARAMPATASAAPAPSRTPMGGESTPRASAAPAATSAPAAQPE
ARRAPAARTSAPTDGAPMSPARAALAALNAGRKGTAGRAGGSTNANRAGTARASDEAPAG
ADPEPEPAASAGTSAAAPTPAAAPRACVYREADGVAPVFSGEWPALAAEIPARGLAQQLA
FQSELTEVAGRALHLRVPLRQLADAATTDKLRQVLSEHFGDDVQLHVELGQVGTTAASLA
AEAAAARQRAAEQAIADDPLMRELIEEFDAQILPGSIRPVQ
NT seq
1926 nt
NT seq
+upstream
nt +downstream
nt
atgacctatcaagtactcgcgcgcaaatggcgccccaaaggcttctcgaccctggtgggc
caggagcatgtcgtgcgtgcgttgacgcacgcgctcgagcaacagcgcctgcatcacgcc
tatctgtttaccggcacgcgcggcgtcggcaagacgacgctttcgcgcattctggccaaa
gcgctcaattgcgagacggggattacggcggaaccttgcggcgtctgtaaggcgtgcaag
gccatcgacgaagggcgcttcgtcgattacgtcgaaatggacgcggcctcgaaccgtggc
gtcgacgaaatgacgtcgctactcgaaaaggcggtctacgcaccggcggacgcgcgcttc
aaggtctacatgatcgacgaagtgcacatgctcaccgggcacgcctttaatgcgatgctc
aagacgctcgaagaaccgcccgcgcacgtcaaattcattctcgcgacgaccgatccccag
aagattccggtcaccgtgctttcccgctgtctgcaattcaatctgaagcagatgccggca
gggcatatcgtgtcgcacctcacgaacatcctcggcgaagaagggatcgagaacgaaccg
caagcgttgcgcctgctcgccaaagcggcgggcggcagcatgcgcgatgcgctatcgctc
accgatcaggccatcgcttacgccgccggaccgctcaccgagacggccgtgcgcggcatg
ctcggcgcgatcgaccagagcgtgctggtgcgtctgctcgacgccctcaaagacgagtcg
cgcacagatctgctcgcgattgccgacgaaatggccgagcgcagtttctcgttcgcgtcg
gggctgcaggatctcggcagcctgctccacaagatcgcactggcgcaatacgcgccgcag
gccgtgtccgacgactggcccgaagcggcggacgtgcgacgtctggcccaagcgctgtcg
cccgaagcggttcagctctattaccagatcgccacgcgtgcgcgcggcgaactcggcctg
gcacccgacgaatacaccggtttctcgatggcgctgttgcgcatggcggcgttcacgccg
ttgctcgcgggaggcacgctcgccgaaccgccgacgccacaggccgcaggtgctgcgcgt
gcgatgcctgcgaccgcgtcggccgcgccagcgccttcgcgcaccccgatgggcggcgag
tcgacgccgcgcgcatcggccgcacctgcagccacatcggcaccggcagcacaaccggaa
gcgcgccgcgcaccggccgcacgcaccagtgcaccgaccgacggtgcaccgatgtcgcct
gcacgtgccgcgctcgctgcgctgaacgcgggacgcaagggcacggcagggcgcgccggt
ggcagcaccaacgccaatcgcgctggcacggcacgcgcgtcggacgaagcaccggccggt
gccgatccggagcccgagcctgctgcatctgcagggacgtcagccgcagcacccaccccg
gcggcggcaccgcgcgcctgcgtctatcgcgaagccgacggcgtcgccccggtcttttcg
ggcgaatggccagcattggccgctgagatcccggcacggggtctcgcacaacagttggcc
tttcagagcgaattgacggaggtggcggggcgcgccttgcacttgcgcgtgccattgcgc
caactggcggacgcggcgaccaccgacaaactgcgtcaggtgctctcggagcatttcggc
gacgacgtgcaactgcacgtcgaactgggtcaggtcggcaccaccgccgcttcgctggca
gcggaagcggccgcggcgcggcagcgggccgccgaacaggcgattgccgacgatccgctc
atgcgtgagctgatcgaggaattcgacgcccagatccttccgggaagcattcgcccggta
caataa
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