Pandoraea commovens: NTU39_11485
Help
Entry
NTU39_11485 CDS
T08365
Name
(GenBank) pseudouridine synthase
KO
K06183
16S rRNA pseudouridine516 synthase [EC:
5.4.99.19
]
Organism
pcom
Pandoraea commovens
Brite
KEGG Orthology (KO) [BR:
pcom00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pcom03009
]
NTU39_11485
Enzymes [BR:
pcom01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.19 16S rRNA pseudouridine516 synthase
NTU39_11485
Ribosome biogenesis [BR:
pcom03009
]
Prokaryotic type
rRNA modification factors
16S rRNA modification factors
NTU39_11485
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
Motif
Other DBs
NCBI-ProteinID:
UVA81572
LinkDB
All DBs
Position
complement(2453976..2454647)
Genome browser
AA seq
223 aa
AA seq
DB search
MCRKLIQSGAFAIDGVVHDNFRESVEPKGLQFTLDGESWDYREHVYILLNKPEGFECSTS
PTHHEGVHSLLPLPLAVRGVQPAGRLDQDTTGMLLLSDDGPFLHAMMSPRRHVPKRYVAT
TKHPVTEEMLQALRNGVLLRDETEPLAATDVMSPSSHEIALTITQGKYHQVKRMVAAAGN
RVEGLVRTAIGGLPMGTLELGEWRYLSPDELLSLPYEIPLTAK
NT seq
672 nt
NT seq
+upstream
nt +downstream
nt
atgtgccgcaagctcatccaatccggtgctttcgccatcgacggcgtcgtgcacgacaac
ttccgagagtcggtcgaaccgaaagggcttcagttcacgctggacggcgagtcctgggac
taccgcgagcatgtctacatcctgctcaacaaacctgaaggtttcgagtgctccacgagc
ccgacacatcacgagggcgtgcattcgctgttgccgctcccgctcgccgtgcgtggcgtc
caaccggccggtcgtctcgatcaggacaccaccggcatgctgctactctccgacgacggc
cccttcctgcacgccatgatgtcgccacgccgccacgtacctaaacggtatgtcgcgacg
acaaagcacccggtgacggaagaaatgttgcaggcactgcgcaacggcgtgctgttgcgc
gacgagaccgagccgctcgctgcaacggacgtcatgagcccgtcatcccacgaaattgca
ctcacgatcacgcaagggaaataccaccaggtcaagcggatggtggctgctgcgggcaat
cgcgtggaaggtctggtaagaacagccatcggcggcttgccgatgggcacactcgaactc
ggcgaatggcgttatctgtcaccggacgaattgctgtcgttgccgtacgagattccgctg
accgccaagtaa
DBGET
integrated database retrieval system
