Pandoraea commovens: NTU39_11635
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Entry
NTU39_11635 CDS
T08365
Name
(GenBank) pseudouridine synthase
KO
K06178
23S rRNA pseudouridine2605 synthase [EC:
5.4.99.22
]
Organism
pcom
Pandoraea commovens
Brite
KEGG Orthology (KO) [BR:
pcom00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pcom03009
]
NTU39_11635
Enzymes [BR:
pcom01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.22 23S rRNA pseudouridine2605 synthase
NTU39_11635
Ribosome biogenesis [BR:
pcom03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
NTU39_11635
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
Motif
Other DBs
NCBI-ProteinID:
UVA82104
UniProt:
A0ABY5QN79
LinkDB
All DBs
Position
2493014..2494819
Genome browser
AA seq
601 aa
AA seq
DB search
MHARDAGAEARSPEGEGGDEKASRRGLRRGPRSLIARRRAAQQAKREGDDTGEFAGSDAA
SGQPSPEAQQGPASGAEGAPSAAQTRGRANTRKPRGGKRDDAQQAAQPAQAGGAAPGGRQ
QRGAPGAQNAQGDRGGQGAASKTQGRGRKGPAGGARSGAGGKGGAGNAGDSDLFAFVTSG
GFDGDDAEGDNAAAKRGRRPADRRVLSPDDEAPKLHKVLAEAGMGSRREMEELILAGRVS
VNSEPAHIGQRILPTDQVRINGKLVKRRITSKPPRVLLYHKPAGEIVSHADPEGRTSVFD
RLPPMKTAKWLAVGRLDFNTEGLLILTTSGDLANRFMHPRYEIEREYAVRTVGQLTEASR
QQLLHGIKLDDGEANFLRLKDGGGEGSNHWYHVALAEGRNREVRRMFDAAGLMVSRLIRT
RYGPLTLPRGLKRGRYEEMDEAQVRSLFAAVGMKMPGAASDEKGARNGANGGRGGKAGAA
KEPRRQPDPMQTALGVFAREPGQSRRPRANPLTAFVGPSGGFQAPSPRGEGRRFGGGNST
GGFGGQSRGGNSSGNGGNGGGGGNGGYGGGNANGNRSRGGNRTGGGGGQGNRGNRGGNRS
R
NT seq
1806 nt
NT seq
+upstream
nt +downstream
nt
ctgcacgcccgcgatgccggtgccgaagcacgttcgccggaaggcgagggtggcgatgaa
aaggcgtcgcgccgcggtttgcgccgtggcccgcgcagtctgatcgcgcgccgccgtgcg
gctcagcaagccaagcgtgaaggcgacgacaccggcgagttcgccggctcggacgccgcg
tcaggccaaccttctcccgaggctcagcaaggcccggcgtccggtgccgaaggtgcgccg
tccgccgcgcagacgcgaggccgtgccaacacgcgaaagccgcgtggcggcaagcgtgac
gacgcccagcaggctgcgcaaccggcacaggccggcggtgctgcgccgggtggccgtcag
cagcgcggcgctccgggtgcccaaaatgcgcagggtgatcgaggcggccagggcgccgcg
agcaagacgcagggtcgtggccgcaagggcccggcgggcggggctcgcagcggtgccggt
ggcaagggtggcgcagggaatgcaggcgacagcgatctgttcgccttcgtgacgtcgggc
ggtttcgatggtgacgacgccgagggcgacaacgcagctgccaagcgcggtcgccgtccg
gccgatcgtcgggtgctctcgcctgacgacgaagcgccgaagctgcataaggtgctggcc
gaggccggtatgggctcgcgtcgcgaaatggaagagctgattcttgcgggtcgcgtgtcg
gtgaattccgagccggcgcacatcgggcagcgcattttgccgaccgatcaggttcgcatc
aacggcaagctcgtcaagcgtcgtatcaccagcaagccgccgcgcgtgctgctgtatcac
aagcctgccggcgaaatcgtcagccatgccgatccggaaggccgcacctcggtgttcgac
cgcctgccgccgatgaagacggccaagtggctcgccgtcggacgtctggacttcaacacg
gaaggtctgctgatcctgacgacgtcgggcgatctggccaaccgtttcatgcacccgcgt
tacgaaatcgagcgtgaatacgccgtgcgcaccgtggggcaactgaccgaagcgtcgcgt
cagcaactgttgcacggcatcaagctggacgacggtgaggccaacttcctgcgcctgaaa
gatggcggcggcgaaggttcgaatcactggtatcacgtggcgctggccgaaggccgcaat
cgcgaagtgcgtcgtatgttcgatgcggccggtttgatggtgagccgtctgatccgtacg
cgttacggcccgctgacgctgccgcgcggcctcaagcgtggtcgctatgaggagatggac
gaagcgcaggtgcgttcgctgttcgccgctgtcggcatgaagatgcccggcgcagcgtcg
gacgaaaagggtgcgcgtaatggcgcaaatggtggccgtggcggtaaggccggtgccgcg
aaggagccgcgccgtcagccggatccgatgcaaacggcgctgggtgtctttgctcgcgag
ccggggcagtcgcgtcgtccgcgcgccaatccgctgaccgcgtttgtcggtccgagcggc
ggctttcaggcgccgtcgccgcgcggtgaaggtcgccgcttcggcggtggcaatagcacg
ggcggtttcggcggtcagtcgcgcggtggtaacagcagcggcaacggcggaaatggcgga
ggcggtggaaatgggggctacggcggcggcaacgctaacggcaatcgcagccgtggcggc
aaccggacgggcggcggcggaggccagggcaaccgtggcaatcgcggcggcaaccggtct
cgctga
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