Pandoraea commovens: NTU39_11660
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Entry
NTU39_11660 CDS
T08365
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
pcom
Pandoraea commovens
Brite
KEGG Orthology (KO) [BR:
pcom00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pcom03016
]
NTU39_11660 (truB)
Enzymes [BR:
pcom01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
NTU39_11660 (truB)
Transfer RNA biogenesis [BR:
pcom03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
NTU39_11660 (truB)
Prokaryotic type
NTU39_11660 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB-C_2
Motif
Other DBs
NCBI-ProteinID:
UVA81601
LinkDB
All DBs
Position
2500822..2501808
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AA seq
328 aa
AA seq
DB search
MTDPRSQAPRQKLPRFPLDGVLLLDKPLGLSSNDALIKAKRLLQALKAGHTGTLDPLATG
LLPLCFGEATKFSQDLLEADKTYEARVRLGETTTTGDAEGEVLQTRPVTVDEAAIRAVLP
RFTGPISQVPPMYSALKRDGKPLYEYARAGQTLEREARNVTIHLLEMTACALPDENEFTF
RVTCSKGTYVRTLAEDIGEALGCGAHLRALRRTAVGPLTLDGAVTLEDLSALDHAQRVEK
LAPVDALLKTLPVVSLDETLAKRFSHGQRLRLDEIRCPQALRECAASHDGIEVKVYAEAT
AETAARLLGVARLDSEALLTPQRLLKTQ
NT seq
987 nt
NT seq
+upstream
nt +downstream
nt
atgacggacccgcgttcgcaggcaccccgccaaaaactccctcgtttcccgctcgacggc
gtgttgctgctcgacaagccactgggcctgtcgtccaacgacgccctgatcaaggccaaa
cgtctgcttcaggcgttgaaggcggggcataccggtacgctcgacccgctcgcaacagga
ttgctgccgttgtgtttcggcgaagcgacgaagttttcgcaggacttgctcgaagccgac
aagacttacgaggcacgcgtgcgtctcggcgagacgacgacgacgggcgacgcggaaggg
gaggtgctgcaaacgcgtccggtgacggtggacgaagcggcgatccgtgcggtactgccg
cgctttaccggtcccatttcgcaggtgcccccgatgtattccgcgctcaagcgcgacggc
aagccgctgtacgaatatgcgcgtgcggggcagaccctcgaacgtgaagcccgcaacgtc
acgatccatttgctggagatgacggcgtgcgcgttgccggacgagaacgaattcaccttc
cgggtgacgtgcagcaagggcacgtatgtgcgcacgctggcggaagacattggcgaagcg
ttgggatgtggcgcgcatctacgcgcgttgcgccgcacggcggttggcccactgacgctc
gacggtgcggtgacgctcgaagacctgagcgcgctcgatcatgcgcaacgcgtggagaag
ctcgcgccggtcgatgcgttgctcaagacgctgccggtggtgtcgctcgacgagacgttg
gcgaagcggttcagtcacggccagcgtttgcgtcttgacgagatacgctgcccgcaagcc
ctgcgcgagtgcgcggcgtcgcatgacggcatcgaagtgaaagtctacgcagaggccacc
gcagagacggccgcgcgactgttgggtgtcgcgcgtctggacagcgaagcgctgctcaca
ccgcaacggttgctgaagacacagtaa
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