Pandoraea commovens: NTU39_11770
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Entry
NTU39_11770 CDS
T08365
Name
(GenBank) CysB family HTH-type transcriptional regulator
KO
K13635
LysR family transcriptional regulator, cys regulon transcriptional activator
Organism
pcom
Pandoraea commovens
Brite
KEGG Orthology (KO) [BR:
pcom00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pcom03000
]
NTU39_11770
Transcription factors [BR:
pcom03000
]
Prokaryotic type
Helix-turn-helix
LysR family
NTU39_11770
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
LysR_substrate
HTH_1
HTH_30
MarR_2
PBP_like_2
Motif
Other DBs
NCBI-ProteinID:
UVA81621
LinkDB
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Position
2525675..2526613
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AA seq
312 aa
AA seq
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MNFQQLRYVREAVRQNLNLTEAASALYTSQSGVSKQIKDLEDELGVDVFVRRGKRLTGLT
EPGKAVLQLIERMLLDAENLRRVARQFADQDSGHLVVATTHTQARYALPQVIKQFTSVFP
KVHLALRQGSPRQIAQMVIDGEADIGITTEALDRFPDIVTFPCYSWHHVAVVPKEHPLVG
RENLTLADIAEYPIITYDGDFTGRSHVDKAFTDQGLVPDIVLTALDTDVIKTYVELGLGI
GIVAAMAVDPRKDQDLAVLELENAFEPSTTRIGLRRGAFLRSYAYRFIEMLAPALKEQEI
STQLREALEFAA
NT seq
939 nt
NT seq
+upstream
nt +downstream
nt
atgaatttccagcaattgcgctacgtgcgcgaagcggttcggcagaacctcaatctgacg
gaagcggccagtgcgctgtacacgtcgcaatcgggcgtgagcaagcagatcaaggatctg
gaggacgagctcggcgtggacgtctttgtgcgtcgcggcaaacgcctcacgggcctgact
gagccgggcaaggcggtgctgcaactgatcgagcgcatgctgctcgacgccgagaacctg
cgccgtgtggcgcgtcagttcgccgatcaggacagcgggcaccttgtggtcgccaccaca
cacacgcaggcgcgctacgcactgccgcaggtgatcaagcagttcacgagcgtcttcccg
aaggtacatctggcgttgcgccagggcagcccgcgccagatcgcgcagatggtcatcgac
ggcgaagcggatatcggcattacgaccgaggcgcttgatcgctttcccgacatcgtcacg
ttcccgtgctattcatggcatcacgtggctgtcgtgccgaaggagcacccgctggtcggc
cgcgagaacctgacgctcgccgacatcgccgaatacccgatcatcacgtatgacggcgat
ttcacgggccgctcacacgtggacaaagcgttcaccgatcaggggctggtgccggatatc
gtgctgaccgcgctcgatacggacgtcatcaagacgtacgtcgaactggggctgggcatc
ggcattgtggcggcgatggcggttgatccgcgcaaggatcaggatctggccgtgctggaa
ctcgaaaatgcgttcgagccgagcacgacgcgcatcggcctgcgacgcggcgcattcctg
cgctcgtacgcgtatcgtttcatcgaaatgctcgcccctgcgctcaaggagcaggaaatc
tcgacgcagttgcgcgaggcgctggagtttgcggcctga
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