Pandoraea commovens: NTU39_12020
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Entry
NTU39_12020 CDS
T08365
Name
(GenBank) uracil-DNA glycosylase
KO
K21929
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
pcom
Pandoraea commovens
Pathway
pcom03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
pcom00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
NTU39_12020
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pcom03400
]
NTU39_12020
Enzymes [BR:
pcom01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
NTU39_12020
DNA repair and recombination proteins [BR:
pcom03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
NTU39_12020
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
UVA81665
LinkDB
All DBs
Position
2580879..2581982
Genome browser
AA seq
367 aa
AA seq
DB search
MPWPKAILEEFGLWPVWMSNDAVANAAHAAQVAGVAAAASAEHGDVATLDAPGAAQSDDL
PPWDVAPSAVPSGAPVSVARPAVARPSALDDAPALPSSPAPPAPRDFAPTPVARETSRRA
SSDMPPDDIPMWLDSEGNGDGDAAADAALWSIVRDAGEDAPSRPALPGVETLDWEALTER
VAGCRLCGLCEKRTQTVFGVGDREADWLLVGEAPGQQEDLQGEPFVGQAGKLLDNMLRAS
ALRRGENVYIANVLKCRPPNNRDPEPAEVASCEPYLKRQVALLKPRVIVVMGRFAAQSIL
RTQASIASLRGRVHEYEGVPVIVTYHPAYLLRSLPDKAKAWTDWCLARATYEAVCETTPD
HNTPTAN
NT seq
1104 nt
NT seq
+upstream
nt +downstream
nt
gtgccgtggcctaaagcgattctggaagagttcgggctgtggccggtatggatgtccaac
gacgctgtggcgaatgctgcccatgcggcgcaggtcgccggtgttgcggctgcggcgtct
gccgagcatggcgacgtggcgacgctcgatgcgccgggtgccgcacaaagcgacgacttg
ccgccgtgggatgtcgcgccgtcggcggtgccatcaggcgcgccggtgagtgttgcgcgt
cctgccgttgcccgtccgtccgctttagacgatgcgcctgcgcttccttcgtctcccgca
cctcccgcgccgcgcgacttcgcgccgacgccggtggcacgggagacttcgcgtcgcgcc
tcctctgacatgccgcccgacgacatcccgatgtggctggacagcgaaggcaatggcgat
ggcgatgccgccgccgatgccgcgctgtggtcgatcgtgcgcgatgcgggcgaggatgct
ccttcgcgtcccgcattgccgggcgtggagacgctggactgggaagcgctcacggaacgc
gttgccggttgccgtttgtgcggtttgtgcgagaagcgcacgcagacggttttcggcgtt
ggcgaccgcgaggccgactggctgctggtgggcgaagcgcccgggcagcaggaggacttg
cagggcgagccgttcgtcggtcaggcgggtaagctgcttgataacatgctgcgggcgtcg
gcgttgcggcgaggcgagaacgtgtacatcgccaacgtgctcaagtgccgtccgccgaac
aaccgcgatccggagccggctgaagtggcgagttgcgagccttatctgaagcgtcaggtc
gcgttgctcaaaccacgcgtgatcgtggtgatgggccgctttgctgcccagagcattttg
cgcacgcaggcgagcatcgccagcttgcgcggacgcgtgcatgagtacgaaggggtgccg
gtgatcgtgacttaccatccggcctatctgttgcgcagtctgcccgacaaggccaaggcc
tggacggattggtgcctggcgcgggctacctatgaggccgtgtgcgaaacgactccggac
cacaacacgcctacggcgaactga
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