Pandoraea commovens: NTU39_12095
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Entry
NTU39_12095 CDS
T08365
Symbol
smc
Name
(GenBank) chromosome segregation protein SMC
KO
K03529
chromosome segregation protein
Organism
pcom
Pandoraea commovens
Brite
KEGG Orthology (KO) [BR:
pcom00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pcom03036
]
NTU39_12095 (smc)
Chromosome and associated proteins [BR:
pcom03036
]
Prokaryotic type
Chromosome partitioning proteins
Condensin-like complex
NTU39_12095 (smc)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SMC_N
AAA_23
AAA_21
SMC_hinge
AAA_15
ABC_tran
AAA_29
Tropomyosin
Elf4
Motif
Other DBs
NCBI-ProteinID:
UVA81680
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All DBs
Position
2599354..2602869
Genome browser
AA seq
1171 aa
AA seq
DB search
MRLTSIKLAGFKSFVDPTNFAVPGQLVGIVGPNGCGKSNIIDAVRWVLGESRASELRGES
MQDVIFNGSTARKQASRASVELVFDNSAGRAAGQWSQYAEIAVKRVLTRDGTSSYYINNL
PARRRDIQDIFLGTGLGPRAYAIIGQGMISRIIEAKPEELRVFLEEAAGVSKYKERRRET
ENRLQDTRENLTRVEDILRELGTNLEKLESQAVVANRFKDLQRDGEEKQQLLWLLRKNEA
QNEQERQQRAIESAQVDLEAQMSRLRGSESDLETLRAAHYTATDAVQAAQSAMYEANSEV
SRLEAEIRYVVESRNRVQAQLAALTSQREQWQARSAQSEEELALAEEELIIAEERAATAQ
DQAADQNEALPALESGWRDAQNLLNEQRSEIAQVEQNLKLEAAHQRNADQALQQLQQRQE
RLQGEARGLDKPDEAELELQRGDLAEHQAMLEDAQAELADAEERLPRLEAERAEAQARVQ
SEAATIAQLEARLTALKQLQESVQTEGKVQPWLDKHELAQLPRLWKKLHIEPGWEPALES
VLRERLAALEISNLDWVKAFASDAPPAKLAFYSPPPAARPVEAPASLRPLLSLLRIDDPG
LRAVLQEWLGHVFVADDLAQAMVARAQLPEGASIVVKAGHQVTRVGVQLYAADSEQAGLL
ARQQEIENLGKQLRAQALLSDEAKSAAVRAEAAYSQAAQSLSEVRGRAERATQRVHALQM
DVLKLTQAYERYNARSTQIDEELREIAAQIEEQLAMRAESEANFEQSDARLAELQATFED
GQLEFESLDSQLSDARNRARELERLAQEASYGQKGISSKIDEHRRSIQTALEQAERLVVS
IEQAQAELALITEQTAENGLQDALELRAEKEEILGAARIELDALTQKLRQSDEERLAAER
GLQPLRDRITELQLKEQAARLNREQFVEQLTTAEVDEEVLSAKLTADMKPSYLQGEVTRI
NNAINALGPVNMAALEELETARERKVFLDAQSADLNDAIETLEGAIRKIDEETRVLLQGT
FDEVNKHFGELFPMLFGGGQAKLIMTGDEILDAGVQVMAQPPGKKNSTIHLLSGGEKALT
AIALVFGMFQLNPAPFCLLDEVDAPLDDANTERYAKMVARMSDRTQFVFISHNKIAMEMA
NQLIGVTMQEQGVSRIVAVDMESAINLAEIA
NT seq
3516 nt
NT seq
+upstream
nt +downstream
nt
gtgcgtctgacttccatcaaactcgctggcttcaaatctttcgtcgacccgacgaacttc
gcggtgcccggccagctggtcgggatcgtcggcccgaacgggtgcggcaaatccaacatc
atcgatgccgtgcgctgggtgctcggcgagtcgcgcgcttccgagctgcgcggcgaatcg
atgcaggacgtgattttcaacggatcgaccgcccgcaagcaagcgagccgcgcaagcgtc
gaactggtgttcgacaacagcgccgggcgcgctgccgggcagtggagccagtacgccgaa
atcgccgtcaagcgcgtgctcacgcgcgacggcacctccagttactacatcaataacctg
ccggcacgccgccgcgatattcaggacattttcctcggcacgggccttgggccgcgcgcc
tacgccatcattggccaggggatgatttcgcgaatcatcgaggcgaagccggaagagctg
cgcgtgtttctcgaagaggccgcgggcgtctccaagtacaaggaacgccgtcgcgagacc
gagaaccgtttgcaggacacgcgcgaaaacctgacgcgcgtggaagacattcttcgcgaa
ctcggcaccaacctcgaaaagcttgaatcgcaggcggtcgtcgccaatcgattcaaggac
ttgcaacgcgacggcgaagaaaagcagcagttgctctggctgcttcgcaagaacgaagcg
cagaacgagcaagaacgccagcagcgtgccatcgagtcggcgcaggtcgatctggaagcg
cagatgtcgcgtttgcgcggctccgagtccgatctcgaaacgctgcgcgccgcgcactac
acggccaccgacgccgtacaggccgcgcaaagcgccatgtacgaggcgaactcggaagtc
agccgtctggaagccgaaattcgttacgtggtcgagtcgcgcaaccgcgtgcaggcgcag
ttggcggcgctgacctcgcagcgcgagcagtggcaggcccgttcggcgcagtcggaagaa
gaactcgcgctcgccgaagaagaactcatcatcgccgaggaacgcgcggcgactgcacag
gaccaggccgccgatcagaacgaggcgctgcccgcgctcgaatccggctggcgcgatgcg
cagaacctgctcaacgagcaacgcagcgagatcgcgcaggtcgagcagaatctgaaactg
gaagcggcgcatcagcgcaatgccgatcaggcgctgcagcagttgcagcagcgtcaggag
cgtttgcagggtgaggcgcgcgggctcgataagcccgacgaagccgagcttgagctgcag
cgcggcgacctcgccgaacatcaggcgatgctcgaagatgcgcaggccgaactggcggac
gccgaagaacgtctgccgcgactcgaagccgagcgtgccgaagcgcaggcgcgcgtgcag
tcggaagcggcgacgatcgcccagcttgaggcacgtctgacggccctcaagcaactccag
gaaagtgttcagacggaaggcaaggtgcagccgtggctcgacaagcacgagctggcgcaa
ttgccgcgtctgtggaagaagctgcatatcgagccgggctgggagccggcgctcgaatcg
gtgctgcgcgaacgtctcgctgcgctcgaaatcagcaatctcgattgggtgaaggccttt
gcgagcgatgcgccgccggccaagctggcgttctattcgccgccgccggccgcgcgtccg
gtggaagccccggcgtcgctgcgtccgctgttgtcgttgctgcgcattgacgatccgggc
ctgcgcgccgtgctccaagaatggctcggccacgtcttcgttgccgacgatctcgcgcag
gcgatggtggcccgcgcgcagttgccggagggggcgtcgattgtcgtcaaggcaggccat
caggtcacgcgcgtcggcgtccagctttatgcggctgactccgagcaggccggtttgctc
gcccgtcagcaagaaatcgagaacctgggcaagcaactgcgtgcgcaggcattgctttcc
gacgaagccaagtcggctgccgtgcgtgccgaggcggcttacagccaggcagcgcagtcg
ctgagcgaagtgcgcggacgcgccgagcgcgccacgcaacgcgtgcacgccttgcagatg
gacgtgctcaagctcacgcaggcttacgagcgctacaacgcccgcagtacgcagatcgat
gaagaactgcgtgaaatcgccgcacagatcgaagagcaactggcgatgcgcgctgaatcg
gaggcgaacttcgagcaaagcgacgcgcgtctggccgagttgcaggccacgttcgaagac
ggtcagctcgaattcgaatcgctcgacagtcagttgtccgatgcgcgtaatcgcgcccgt
gaactggaacgtctggcgcaggaagcgtcgtatggtcagaagggcatctccagcaagatc
gacgagcatcgccgcagcattcagacggcgctcgaacaggctgagcgcctcgttgtctcg
attgagcaggcgcaggcagaactcgcgctgatcaccgagcagacggccgaaaacggtttg
caggacgcactcgaactgcgtgccgagaaggaagagattctgggcgccgcccgcatcgaa
ctcgacgcactgacgcaaaagctgcgtcaaagcgacgaagagcggctggccgcagagcgc
ggtttgcagcccctgcgcgatcgcattacggaattgcagttgaaggagcaggcggcgcgc
ctgaatcgcgagcagttcgtcgagcaactgacgacggccgaagtggacgaagaggtgctc
tccgcgaagctcacggcggacatgaagccgtcgtatctacaaggcgaagtcacgcgtatc
aacaacgcgatcaacgcgctcggaccggtcaacatggccgcgctcgaagaattggagacg
gcgcgcgagcgcaaggtcttcctcgatgcgcaatcggcggacctgaacgacgccatcgag
accctcgaaggtgccatccgcaagatcgacgaagagacgcgcgtgctgctgcaaggcacg
ttcgacgaagtgaacaagcatttcggcgaactgttcccgatgctgttcggcggcggccag
gcgaaactcatcatgaccggtgacgaaattctcgatgccggtgtgcaggtcatggcgcaa
ccgccgggcaagaagaactccacgatccatctgctgtcagggggagagaaggcgctcacg
gccattgcgctggtgttcgggatgttccagctcaatcctgcgccgttctgtttgcttgac
gaggtggacgcgccgctcgacgacgccaacaccgagcgctacgccaagatggtggcgcgc
atgtcggaccgtacccaattcgtatttatttcgcataacaaaatcgcgatggaaatggcc
aatcagctcatcggcgtcaccatgcaggaacaaggggtgtcgcggatcgtggcggtggac
atggagtctgcgatcaatctggccgagatcgcctga
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