KEGG   Pandoraea commovens: NTU39_12275
Entry
NTU39_12275       CDS       T08365                                 
Name
(GenBank) HsdR family type I site-specific deoxyribonuclease
  KO
K01153  type I restriction enzyme, R subunit [EC:3.1.21.3]
Organism
pcom  Pandoraea commovens
Brite
KEGG Orthology (KO) [BR:pcom00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:pcom02048]
    NTU39_12275
Enzymes [BR:pcom01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.21  Endodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.21.3  type I site-specific deoxyribonuclease
     NTU39_12275
Prokaryotic defense system [BR:pcom02048]
 Restriction and modification system (R-M system)
  Type I R-M system
   NTU39_12275
SSDB
Motif
Pfam: SWI2_SNF2 T1R_D3-like HSDR_N ResIII T1RH-like_C DEAD TPR_14
Other DBs
NCBI-ProteinID: UVA81714
LinkDB
Position
complement(2642930..2645986)
AA seq 1018 aa
MSTVGQIEKKTQERVVKLFVESLGYEYLGNWIDRVGNRNVEHALLVRFLRRQGHDDALIV
RTLHVLDKVSDDQSKSIYNRNKAVYEMLRYGVKVKPEVGENTQTVWLINWRQPLDNHFAV
AEEVTVNGADAKANTKRPDVVLYVNGIALGVLELKRSTVSVSEGIRQNLDNQKKVFIQHF
FSTMQFVMAGNDTEGLRYGSIETPEKYYLTWKEDSPIENLLDRQLTQVCNKTRFLELIHD
FIVYDAGIKKLCRQNQYFGVRAAQDHVKRREGGIVWHTQGSGKSLTMVWLTKWIRENVKD
ARVLIITDRTELDEQIEKVFKGVNEEIYRTKSGADLIATLNSTTPWLLCSLIHKFGGKAS
DDDAADISGFVQELKNSLPADFRAKGDLYVFVDECHRTQSGELHDAMTAILPNAMFIGFT
GTPLLKADKRKSIEVFGRYIHTYKFDEAVKDGVVLDLRYEARDIDQDITSQKKIDQWFEA
KTKGLTNLAKAQLKQKWGTMQRVLSSQSRLEKIAADILLDMETRDRLMSGHGNAILVSGS
IYQACKFYELFAKTDLADKCAIVTSYRPSPADIKGESAEGLTEKLRQYEIYNKMLNGQEP
DAFEKDVKKKFIDEPGQMKLLIVVDKLLTGFDAPSATYLYIDKQMRDHGLFQAICRVNRL
DGDDKEYGYIVDYKDLFKSLENSIHDYTSGALDGYDKDDVAGLLEDRLAKAHEQLEEARE
AIKALCEAVDAPKDTPAYLRYFCAKDSGNAEQLKDNEPKRLALYKFTSAFIRAFAGLANE
LEAAGYTPADIAALEAETRHFDKVRNEVKLASGDYIDLKMYEPAMRHLIDTYIRAEESEP
ISAFDDLSLIQLIVERGAGAVDALPKGIRESKEAVAETIENNVRKLIIDEQPINPKYYER
MSELLDALIEKRRADALAYEEYLAKIVELAKQAKNPATGAAYPTALNTAAKRALYDNLGQ
DETLALNVDSAIRRSRQDNWRGNRMKILMVKNAIKAIFDGDEERTEVILELAKNQHEY
NT seq 3057 nt   +upstreamnt  +downstreamnt
atgagcaccgtgggccagatcgagaaaaaaacgcaagagcgtgtcgtcaagctgttcgtg
gaatcactggggtacgagtatctgggcaattggatcgaccgagtcggcaatcgaaacgtc
gaacatgccctgttggttcgatttcttaggcgtcaaggccacgacgacgctcttatcgtg
cgaactcttcatgtgctcgataaggtctccgacgaccagagcaaaagcatctacaaccgt
aacaaggctgtttacgagatgctccgctatggcgtgaaagtaaagcccgaggtgggtgag
aacacgcagacggtctggctcatcaactggaggcagccactagacaaccacttcgcggtt
gccgaggaagtcactgtcaacggagctgacgcgaaggcaaatacgaagcggcccgatgtg
gtgctgtacgtcaacggcattgcgttgggtgtcctcgagctgaaacgctccacggtgtcc
gtgtcagagggtattcgccagaacctcgacaatcagaagaaggtattcatccaacacttc
ttctcgacaatgcagttcgtcatggcgggcaacgatacggaaggtttgcgttacggctct
attgagactccggagaagtattaccttacgtggaaggaagacagccccatcgagaacctg
ctcgatcgtcagctgactcaggtctgcaacaagactcgtttcctggagttgatccacgac
ttcatcgtgtacgacgccggcatcaaaaagctgtgccgacaaaatcaatacttcggtgtt
cgggccgcgcaggatcatgtgaaacgccgtgaggggggcatcgtctggcatacccaaggc
tccggcaaaagcctcacgatggtctggctcacgaagtggattcgggaaaatgtcaaagat
gcccgtgtccttatcatcaccgaccggaccgaactagacgagcagattgaaaaggtcttc
aaaggtgtcaatgaagagatatatcgcacgaagagcggtgctgatctcattgcgaccctc
aacagcacaacgccctggcttctgtgttcgttgatccacaaattcggcggcaaagcgagt
gacgacgatgcggccgatatttcaggcttcgtccaggaactgaagaactcattgcccgcc
gattttcgggccaagggcgacctttacgtcttcgtggacgaatgccaccgtactcagtcc
ggcgagttgcacgatgccatgacggccattcttcctaatgcaatgttcatcggcttcaca
ggaacccccttgctcaaagctgacaagcgtaagagcatcgaggtgttcgggcgttacatt
cacacgtacaagtttgatgaggcggtgaaagacggtgtggtgctggacttacgttacgaa
gcccgggacatcgaccaggacatcacgtcgcagaagaaaatcgatcaatggtttgaagcc
aagaccaaagggctgacgaatctggccaaagcgcaactcaagcagaaatggggcacgatg
caacgcgtgctttccagccagtcgagacttgaaaaaatcgctgcggacattctgcttgac
atggaaacgcgtgaccggctgatgagtggccacggcaatgcaatactcgtatcaggcagt
atctatcaggcgtgtaagttctacgagctgttcgcaaaaactgatttggccgacaagtgc
gccatcgtcaccagttaccgaccgtctcccgcagacatcaaaggcgagagcgccgaaggg
ctgacggagaagctgcgtcagtacgagatatacaacaagatgctgaacggccaggagccg
gacgcgtttgagaaggatgtgaagaagaaattcatcgacgagccagggcaaatgaagctc
ctgatcgtagtggataagcttttgactgggttcgatgctccctcggcaacatatctctac
atcgacaagcagatgcgtgaccacggtctgttccaggccatttgtcgcgtgaatcgtctt
gacggcgacgacaaagaatacggctatatcgtcgactacaaggacttgttcaagagcctc
gagaactcgattcatgactatacgtccggcgccttggatggctacgacaaagacgacgtg
gccgggctgcttgaggaccgattggccaaggcccacgaacagctagaagaagctcgagag
gccatcaaagcgctttgtgaggctgtggacgcccctaaggacacaccagcttacctgcgc
tatttctgcgcgaaggactctggcaacgcggagcagctaaaggacaatgagccgaagcgg
cttgcactgtacaagttcacctctgccttcatccgcgcatttgcaggtctagcgaatgag
ctcgaagcggcgggctatacgccagcagacattgcggctctagaggcagagacccgccat
tttgataaggtccgtaacgaagttaaactggccagcggcgactacatcgacctgaagatg
tacgaaccggcgatgcgccatttgatcgacacttacatccgtgccgaggaaagcgagccg
atttctgcgttcgacgacctgtcactgattcagttgatcgttgaacgtggcgccggggcg
gtcgacgccttgccgaagggaattcgtgaaagcaaggaagcagttgcggaaacgatcgag
aacaacgttcgaaaattgatcattgacgagcaaccgatcaatcccaagtattacgagcgg
atgtcggaactactcgacgcactgatcgagaagcgaagagcggacgctctggcatacgag
gagtatctggccaagatcgtcgagctggcgaagcaagcaaagaatccggcaaccggcgct
gcctaccccaccgcactcaatactgctgcgaagcgagcactttatgacaatcttggtcag
gacgagacgctagcacttaatgttgacagcgctattcgccggagtcgacaagacaactgg
cgaggcaatcgcatgaagattttgatggtgaagaacgctatcaaggctatttttgacggc
gacgaagagcgcaccgaagtgattttggaattggcaaagaatcagcatgagtattga

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