Pandoraea commovens: NTU39_12505
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Entry
NTU39_12505 CDS
T08365
Name
(GenBank) HU family DNA-binding protein
KO
K03530
DNA-binding protein HU-beta
Organism
pcom
Pandoraea commovens
Brite
KEGG Orthology (KO) [BR:
pcom00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pcom03032
]
NTU39_12505
03036 Chromosome and associated proteins [BR:
pcom03036
]
NTU39_12505
03400 DNA repair and recombination proteins [BR:
pcom03400
]
NTU39_12505
DNA replication proteins [BR:
pcom03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
NTU39_12505
Chromosome and associated proteins [BR:
pcom03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
NTU39_12505
DNA repair and recombination proteins [BR:
pcom03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
NTU39_12505
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_euk_1
Motif
Other DBs
NCBI-ProteinID:
UVA81754
LinkDB
All DBs
Position
complement(2697160..2697438)
Genome browser
AA seq
92 aa
AA seq
DB search
MNKQELIDAVAGVTGASKAQTGETIDALLETVKKAVAKGDSVQLIGFGSFGSGKRAARTG
RNPKTGEAIKIPAAKTVKFTAGKAFKDAVNKK
NT seq
279 nt
NT seq
+upstream
nt +downstream
nt
atgaacaaacaggaactgatcgacgccgtcgctggtgttacgggtgcaagcaaggctcaa
actggcgaaaccatcgacgctctgctcgagaccgtcaagaaggcagtcgccaagggtgac
tcggttcagttgatcggcttcggctcgttcggttcgggcaagcgcgctgcgcgtaccggc
cgcaacccgaagactggcgaagcgatcaagatcccggcagccaagaccgtgaagttcacg
gctggcaaggcgttcaaggacgctgtgaacaagaagtaa
DBGET
integrated database retrieval system
