Pandoraea commovens: NTU39_13040
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Entry
NTU39_13040 CDS
T08365
Name
(GenBank) citrate synthase family protein
KO
K01647
citrate synthase [EC:
2.3.3.1
]
Organism
pcom
Pandoraea commovens
Pathway
pcom00020
Citrate cycle (TCA cycle)
pcom00630
Glyoxylate and dicarboxylate metabolism
pcom01100
Metabolic pathways
pcom01110
Biosynthesis of secondary metabolites
pcom01120
Microbial metabolism in diverse environments
pcom01200
Carbon metabolism
pcom01210
2-Oxocarboxylic acid metabolism
pcom01230
Biosynthesis of amino acids
Module
pcom_M00009
Citrate cycle (TCA cycle, Krebs cycle)
pcom_M00010
Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate
pcom_M00012
Glyoxylate cycle
Brite
KEGG Orthology (KO) [BR:
pcom00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
NTU39_13040
00630 Glyoxylate and dicarboxylate metabolism
NTU39_13040
Enzymes [BR:
pcom01000
]
2. Transferases
2.3 Acyltransferases
2.3.3 Acyl groups converted into alkyl groups on transfer
2.3.3.1 citrate (Si)-synthase
NTU39_13040
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Citrate_synt
HTH_17
MerR_1
MerR
HTH_23
Sigma70_r4_2
AbiEi_4
HTH_8
HTH_22
Motif
Other DBs
NCBI-ProteinID:
UVA81852
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Position
2840126..2841337
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AA seq
403 aa
AA seq
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MQYFTAKQAAEHLGVSLQTLYAYVSRGLLHAEPGKTHRERRYRASDVERLATQRTRGRKP
KEVVKAALDWGMPVLESSITLIEDGRCYYRGRDALQMAQTASVEATAAWLWQCDEASAFG
DDATASIKHLAVDWPVMLLERYRDRRAEDALLPAFTVASDDASTAIWQRDPVRVAQGSAA
LLRTMTACLLGTLPSHAPIHEQCAAAWSVSDAEGADLIRMALVLCADHELNASSFTARCV
ASTGASLRAAIVAGLSALTGGRHGGTTARNEAMWDEVGEIDTAARMRERLARGEKLPGFG
HHLYPAGDVRASAMLARVLPAHPAWQTMIDSADALIGQRPSLDFALVAVRRHLGLPVGAA
FGLFALGRTIGWIAHAREQRESTQLIRPRAAYVGPRPDDALVE
NT seq
1212 nt
NT seq
+upstream
nt +downstream
nt
atgcaatacttcactgcgaaacaagcggccgagcatctcggcgtgtcgctccagaccctc
tacgcgtacgtcagtcgtggcctgctgcatgccgagccaggcaagacgcatcgtgagcgt
cgctatcgcgcatcggatgtagagcgcctggcgacgcaacgcacgcgcggacgcaagccg
aaggaggtggtcaaggccgcgctggactggggcatgccggtgctggagtcgtccatcacg
ctgatcgaagatggacggtgctactaccggggacgtgacgcgttgcagatggcgcagaca
gcctccgtcgaagccacggcggcgtggctgtggcaatgcgatgaggcgtcggcatttggt
gacgacgcaaccgcctcaatcaagcacctcgccgtcgactggcccgtgatgttgctcgaa
cggtatcgcgaccgccgggccgaagacgcattgctgcccgcattcaccgtcgcgagcgat
gacgcgtcgaccgcgatctggcaacgcgatccggtgcgcgtggcgcagggcagcgccgcg
ttgctacgtacgatgacggcttgcttgctgggcacactgccaagtcacgcgccaattcac
gaacaatgtgcagccgcgtggagcgtgagcgacgccgagggtgccgacctcatccgcatg
gcgctggtgctgtgcgcggaccacgagttgaacgcatcgagcttcacggcccgctgcgtg
gcatcgaccggcgcgagcttgcgcgcggcgatcgtggcggggctgtccgcgctgaccggc
ggccgtcatggtggcaccacggcacgcaatgaagcgatgtgggacgaagtcggcgagatc
gataccgccgcgcgcatgcgtgagcgattggcgcggggtgagaagctgcccggcttcggc
catcatctctatccggccggggatgtacgggcgagtgcgatgctcgcgcgggtcttgcct
gcgcatcccgcgtggcaaacgatgatcgactcggccgacgcattgatcggtcaacgcccg
tcgctcgatttcgccctcgtggcggtgcgccgtcaccttggattgccggtcggggctgcg
ttcggtctcttcgcactcggacgcactatcggctggatcgcgcacgccagagagcaacgc
gagagtacgcaactgattcgtccgcgtgccgcctatgtcggcccgcgacctgacgacgcg
ctcgtcgagtga
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