Pandoraea commovens: NTU39_15705
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Entry
NTU39_15705 CDS
T08365
Symbol
hpnD
Name
(GenBank) presqualene diphosphate synthase HpnD
KO
K02291
15-cis-phytoene synthase [EC:
2.5.1.32
]
Organism
pcom
Pandoraea commovens
Pathway
pcom00906
Carotenoid biosynthesis
pcom01100
Metabolic pathways
pcom01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
pcom00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00906 Carotenoid biosynthesis
NTU39_15705 (hpnD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
pcom01006
]
NTU39_15705 (hpnD)
Enzymes [BR:
pcom01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.32 15-cis-phytoene synthase
NTU39_15705 (hpnD)
Prenyltransferases [BR:
pcom01006
]
Terpene biosynthesis
Squalene/phytoene synthase
NTU39_15705 (hpnD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SQS_PSY
Motif
Other DBs
NCBI-ProteinID:
UVA77552
LinkDB
All DBs
Position
3439280..3440155
Genome browser
AA seq
291 aa
AA seq
DB search
MQPHETADDASGSPANITQANAYCRQKAGPPGSALYYALLQLPPSKRDAAYAVHAFCQEI
ADIHSAVHDPGVAHAKLDWWRQELARLFAGNPAHPVTRALLAVVQSSKLSRDTFEAVLHG
AEMDLSQMRYLDFAGLTHYCDAAGGAPAELTSQVYGFDDPQTPALARALGHAITLGRRVT
DAGVDARSGYVYFPIDELQRFGVTAADIQNGKYSPAFVELMKFQHARARQAITDAAVAIP
KQDRRKQRPLLALAALQLALMDEVAASDYQVLHQRIDLTPLRKFWRAWRAR
NT seq
876 nt
NT seq
+upstream
nt +downstream
nt
atgcaaccccacgagaccgccgacgacgcctccggctcccccgccaacatcacccaggcc
aacgcgtactgccgccaaaaagcaggcccgcccggatccgcgctctattacgccctgctc
caactgccaccatccaagcgcgacgccgcttatgccgtccacgccttttgtcaggaaatc
gccgatattcactcggccgtccatgaccccggcgtcgcacacgccaagctcgactggtgg
cgtcaggagctggcccgcctctttgctggcaaccccgcccatccggtcactcgagcactc
cttgccgtcgtgcaaagcagcaagctctcgcgcgacactttcgaagccgtcctgcacggt
gccgagatggatctctcgcagatgcgctacctcgacttcgccggtctcacgcactattgc
gatgccgccggcggcgcccccgcagaactcacgtcccaagtctacggtttcgacgacccg
caaacgcccgccctcgcgcgcgccctcggccatgccatcacgctcggacgacgtgtcacc
gacgccggtgtcgacgcgcgctccggttacgtctatttccccatcgacgaacttcagcgc
ttcggcgtcactgccgccgacattcagaacggcaagtactcgcccgccttcgtcgagcta
atgaagttccagcacgcacgcgcacgtcaggccatcaccgacgccgccgtcgcgatccct
aagcaggatcgtcgcaagcaacgtccgctgcttgccctcgccgcgctgcagttggcattg
atggacgaagtcgccgcgagcgactatcaagtgctccatcagcgtatcgacctcacgccg
ctgcgcaaattttggcgggcctggcgagctcgctga
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