Pandoraea commovens: NTU39_15815
Help
Entry
NTU39_15815 CDS
T08365
Symbol
rimO
Name
(GenBank) 30S ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
pcom
Pandoraea commovens
Brite
KEGG Orthology (KO) [BR:
pcom00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pcom03009
]
NTU39_15815 (rimO)
Enzymes [BR:
pcom01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
NTU39_15815 (rimO)
Ribosome biogenesis [BR:
pcom03009
]
Prokaryotic type
ribosomal protein modification factors
NTU39_15815 (rimO)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
TRAM_2
UPF0004
YajR_YAM
TRAM
CLP1_P
Motif
Other DBs
NCBI-ProteinID:
UVA77572
LinkDB
All DBs
Position
complement(3471956..3473323)
Genome browser
AA seq
455 aa
AA seq
DB search
MSRPSPAGTPKVGFVSLGCPKALVDSEQILTQLRAEGYDIAGTYDGADLVVVNTCGFIDD
AVQESLDAIGEALAENGKVIVTGCLGAKKDAAGQDIVSAVHPKVLAVTGPHAVGEVMSAV
HTHLPKPHDPFTDLVPPAGIKLTPRHYAYLKISEGCNHRCTFCIIPSMRGDLDSRPVAEV
MLEAENLFKAGVKELLVISQDTSAYGVDVKYRTGFWAGRPLKTRMTELVTALGELAKQYG
AWVRLHYVYPYPHVDEIIPLMAEGHILPYLDVPLQHAHPDVLKRMKRPASGEKNLERIQA
WRKMCPDLTIRSTFIAGFPGETEAEFEYMLDFLREAELDRVGCFAYSPVEGARANELPGA
LPDEVREERRARFMEVAEEISAERQQRKIGKTLQVIVDEINQDGGIARSAADAPEIDGLV
YIEPTAKAAKRLKVGEFVNVEVTGADGHDLWGEVV
NT seq
1368 nt
NT seq
+upstream
nt +downstream
nt
atgtcccgcccatcgcccgccggcacccccaaagtcggcttcgtttcgctcggctgcccc
aaggctttggttgactccgagcagatcctgacccagctccgtgccgaaggctacgacatt
gccggcacctatgacggcgccgacctcgtcgtggtcaacacctgtggcttcatcgacgac
gccgtgcaggaaagtctcgacgccatcggcgaagcgctggccgaaaacggcaaggtgatc
gtcaccggctgtctgggcgccaagaaggacgccgccggtcaggacatcgtgagcgccgtg
cacccgaaggtgctcgccgtcaccggcccgcacgccgtgggcgaagtgatgagcgcggtg
cacacgcacctgcccaagccgcacgatccgttcaccgatctcgtcccgccggctggcatc
aagctcacgccgcgtcactacgcgtatctgaagatttccgaaggctgcaaccatcgctgc
acgttctgcatcatcccgtcgatgcgtggcgatctcgattcgcgtccggtcgcggaagtg
atgctcgaagcggaaaatctgttcaaggcaggcgtcaaggaactgctggtgatctcgcag
gacaccagtgcatatggcgtcgacgtgaagtaccgcaccgggttctgggcgggtcgtccg
ctcaagacgcgcatgaccgaactggtgacggcgctgggcgaactggccaagcaatacggc
gcgtgggtgcgtctgcactacgtctacccgtatccgcacgtcgacgagatcattccgctg
atggccgaaggccacatcctcccgtatctcgacgtgccgctgcaacacgcgcacccggac
gtgctcaagcgcatgaagcgtccggcctcgggtgagaagaatctggagcgcattcaggcc
tggcgcaagatgtgcccggatctgacgatccgcagcacgttcatcgccggtttcccgggc
gagaccgaagccgaattcgaatacatgctggacttcctgcgcgaagccgaactcgaccgc
gtgggctgctttgcctattcgccggtcgaaggcgcgcgcgccaacgaactgccgggcgca
ttgccggacgaagtgcgcgaagagcgtcgtgcgcgcttcatggaagtggccgaggagatt
tcggccgagcgtcagcagcgcaagatcggcaagacgcttcaggtgatcgtcgacgaaatc
aatcaggacggcggcatcgcccgctcggctgccgacgcaccggaaatcgacggactcgtg
tatatcgagccgacggccaaggccgcgaagcgcctcaaggtcggtgagttcgtcaacgtc
gaagtcaccggtgccgacggccacgatctgtggggcgaggtggtctga
DBGET
integrated database retrieval system
