Pandoraea commovens: NTU39_15880
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Entry
NTU39_15880 CDS
T08365
Name
(GenBank) RNA-binding transcriptional accessory protein
KO
K06959
protein Tex
Organism
pcom
Pandoraea commovens
Brite
KEGG Orthology (KO) [BR:
pcom00001
]
09190 Not Included in Pathway or Brite
09192 Unclassified: genetic information processing
99973 Transcription
NTU39_15880
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tex_central_region
Tex_YqgF
Tex_N
HHH_3
HHH_9
S1
S1_RRP5
HHH_7
YqgF
T2SSK
PsbU
Motif
Other DBs
NCBI-ProteinID:
UVA77582
LinkDB
All DBs
Position
3486245..3488599
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AA seq
784 aa
AA seq
DB search
MTQNVALQIVQRIADELNVQPRQVAAAVQLLDEGATVPFIARYRKEVTDNLDDTQLRNLE
ERLLYLRELEDRRGAILASIEEQGKLTDELRTAIVAAETKQTLEDLYLPYKQKRRTRAQI
AREAGLEPLAQALLADPTLDPQVEAAKFVDAEKGVADVKAALDGARDILSEQFGETAELL
GKLRDYLWNQGVVSSKVVEGKESEEGEKFRDYYDYAEPLAAVPSHRALALFRGRNLGILM
VKLGLGEELDAQVPHPCEGVIAGHFGIRQQNRAADKWLGDVCRWSWRVKVQPHLESELLT
QIRESAESEAIRVFARNLKALLLAAPAGPKGVIGLDPGLRTGVKVAVVDATGKLLGTDTI
YPHEPRRDWDGSLARLSKIAAATGAQLVSIGNGTASRETDKLALELIKRHPELKLQKIVV
SEAGASVYSASEFAAKEFPELDVSLRGAVSIARRLQDPLAELVKIEPKAIGVGQYQHDVN
QRELARMLDAVVEDCVNAVGVDVNTASAPLLARVSGLNSTLAKNIVDFRDSNGPFANREA
LKKVPRLGDKTFEQAAGFLRVNGGDNPLDRSSVHPEAYPVVERILAKIKKTIGDVMGNGS
VVRSVSPTEFVDERFGLPTVKDILTELEKPGRDPRPEFKTATFQDGVEKLTDLKPGMQLE
GVVTNVAAFGAFIDIGVHQDGLVHVSAMSTKFIKDPHEVVKAGDIVKVKVLEVDPRRQRI
SLTMRLNDDLPVAGASDRPSSGGGSAGGRGTGGGGHRGGNSGGGRQREPETVNAMAAAFA
KLKR
NT seq
2355 nt
NT seq
+upstream
nt +downstream
nt
atgacgcaaaacgtagcccttcagatcgttcaacgcattgccgacgaacttaacgtgcag
ccgcgtcaggtcgccgccgccgtgcaactgctggacgaaggcgccaccgtgcccttcatc
gctcgctatcgtaaggaagtgaccgataacctcgacgacacgcaactgcgtaatctggaa
gagcgcctgctgtatctgcgcgaactggaagaccgccgcggcgcgattctcgcgagcatc
gaagagcaaggcaagctgaccgacgaactgcgcaccgccatcgtggcggcggaaacgaag
cagacgctcgaagacctttacctcccttacaagcaaaagcgccgcacccgcgcgcagatt
gcccgcgaagctggcctcgagcccctcgcgcaggccctgctcgccgatccgacgctcgac
ccgcaagtcgaagccgccaagttcgtcgacgccgagaagggcgtggccgacgtgaaggct
gccctcgatggcgcgcgcgacatcctgtcggaacagttcggcgaaaccgccgaactcctc
ggcaagctgcgcgactacctctggaatcagggcgtggtgtcgtcaaaggtcgtcgaaggc
aaggaaagcgaggaaggcgagaaattccgcgattactacgactacgccgaaccgctcgct
gcggtgccgtcgcaccgtgcgctcgccctcttccgcggtcgcaacctcggcattctgatg
gtcaagctgggccttggcgaagaactcgacgcgcaggtcccgcatccgtgcgaaggcgtg
atcgccggtcatttcggcattcgccagcagaaccgcgcagccgacaagtggctgggcgac
gtctgccgctggagctggcgcgtgaaggtgcagccgcacctcgagtcggaactgctcacg
cagattcgtgaaagcgccgagagcgaagccattcgtgtgttcgcccgcaacctcaaggcg
ctgctgctcgccgcgcccgccggtccgaagggcgtgatcggtctggacccgggtctgcgt
accggcgtgaaggtggccgtggtcgatgcgaccggcaagctgctcggcaccgacacgatc
tatccgcacgaaccgcgccgcgactgggacggctcgctcgcccgcctgtcgaagattgcc
gccgcgaccggcgcgcaactcgtcagcatcggcaacggcaccgcctcgcgcgagacggac
aagctcgcgctcgaactgatcaagcgccatcccgaactgaagctgcaaaagatcgtagtg
tcggaagccggcgcttcggtgtactcggcctccgaattcgcggcgaaggaattcccggaa
ctggacgtgtcgctgcgcggtgccgtctcgattgcccgccgtctgcaagatccgctggcc
gaactcgtcaagatcgagccgaaggccatcggcgtgggccagtatcagcacgacgtgaac
cagcgcgaactggcacgtatgctggacgccgtcgtcgaggattgcgtgaacgccgtgggc
gtggacgtcaacacggcatcggccccgctgctcgcgcgcgtgtcgggactgaacagcacg
ctcgcgaagaacatcgtggacttccgcgacagcaacggcccgttcgccaatcgtgaagcg
ctcaaaaaggtgccgcgtctgggcgacaagacgttcgaacaggccgcgggcttcctgcgc
gtgaacggcggcgacaatccgctggatcgttcgtcggttcacccggaagcgtatccggtc
gtcgagcgcattctcgccaagatcaaaaagaccattggcgatgtgatgggcaacggttcg
gtcgtgcgcagcgtgtcgccgacggaattcgtcgatgagcgtttcggcctgccgacggtc
aaggacatcctgaccgaactcgaaaagccgggtcgcgacccgcgccccgagttcaaaacc
gcgacgttccaggacggcgtcgagaagctgaccgacctgaagccgggcatgcagctcgaa
ggcgtggtcacgaacgtggccgccttcggtgcgttcatcgatatcggcgtgcatcaggac
ggtctggtccacgtctccgccatgtcgacgaagttcatcaaggacccgcacgaagtcgtg
aaggctggcgatatcgtgaaggtcaaggtgctcgaagtcgatccgcgccgtcagcgtatt
tcgctcaccatgcgtctgaacgacgatctgccggtggccggtgcgagcgatcgcccgagc
agcggcggtggtagcgcaggtggacgcggcaccggcggtggcggtcaccgtggcggcaac
agcggcggtggccgtcagcgcgagccggaaacggtcaacgccatggcagccgctttcgcc
aagctcaagcgctga
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